RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 LIFRP42702 1097 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 TFAP4Q01664 338 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
VAMP1-207ENST00000539047 INTS4Q96HW7 963 aaKnown RBP18.08■□□□□ 0.48
VAMP1-207ENST00000539047 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
VAMP1-207ENST00000539047 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
VAMP1-207ENST00000539047 RASA1P20936 1047 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
VAMP1-207ENST00000539047 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 SLC44A5Q8NCS7 719 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 L3MBTL3Q96JM7 780 aaPredicted RBP18.07■□□□□ 0.48
VAMP1-207ENST00000539047 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 HACL1Q9UJ83 578 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 SLC12A7Q9Y666 1083 aa18.07■□□□□ 0.48
VAMP1-207ENST00000539047 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 CNTNAP1P78357 1384 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 PLIN4Q96Q06 1357 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 DDTLA6NHG4 134 aaPredicted RBP18.06■□□□□ 0.48
VAMP1-207ENST00000539047 EPS15P42566 896 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 GABPAQ06546 454 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 STK3Q13188 491 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 CUL4AQ13619 759 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 FAM47AQ5JRC9 791 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
VAMP1-207ENST00000539047 SGMS1Q86VZ5 419 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 ZFPM1Q8IX07 1006 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
VAMP1-207ENST00000539047 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 CWC22Q9HCG8 908 aaKnown RBP18.06■□□□□ 0.48
VAMP1-207ENST00000539047 PPP2R3BQ9Y5P8 575 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
VAMP1-207ENST00000539047 PITPNM2Q9BZ72 1349 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 ZBTB43O43298 467 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 CALM1P0DP23 149 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 CALM2P0DP24 149 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 CALM3P0DP25 149 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 EVX2Q03828 476 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 ME3Q16798 604 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 CATIPQ7Z7H3 387 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 IGDCC4Q8TDY8 1250 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.05■□□□□ 0.48
VAMP1-207ENST00000539047 TCP11L1Q9NUJ3 509 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 GGA3Q9NZ52 723 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 GREB1LQ9C091 1923 aaPredicted RBP18.05■□□□□ 0.48
VAMP1-207ENST00000539047 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
VAMP1-207ENST00000539047 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
VAMP1-207ENST00000539047 PFKFB2O60825 505 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 EGFRP00533 1210 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
VAMP1-207ENST00000539047 RCAN1P53805 252 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 EVCP57679 992 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
VAMP1-207ENST00000539047 RASA3Q14644 834 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 ANGEL2Q5VTE6 544 aaKnown RBP18.04■□□□□ 0.48
VAMP1-207ENST00000539047 APOA5Q6Q788 366 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
VAMP1-207ENST00000539047 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 TRPM4Q8TD43 1214 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
VAMP1-207ENST00000539047 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 CPLX1O14810 134 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 CDKL5O76039 1030 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 SHMT1P34896 483 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-207ENST00000539047 DCAF15Q66K64 600 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 DGKHQ86XP1 1220 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 ENAHQ8N8S7 591 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-207ENST00000539047 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
VAMP1-207ENST00000539047 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
VAMP1-207ENST00000539047 DDAH1O94760 285 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 LARGE1O95461 756 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
VAMP1-207ENST00000539047 EPHX2P34913 555 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 SEC23AQ15436 765 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 IFFO2Q5TF58 517 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
VAMP1-207ENST00000539047 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 NECAB1Q8N987 351 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
VAMP1-207ENST00000539047 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-207ENST00000539047 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
VAMP1-207ENST00000539047 TBC1D12O60347 775 aa18.01■□□□□ 0.47
VAMP1-207ENST00000539047 ABCB5Q2M3G0 1257 aa18.01■□□□□ 0.47
VAMP1-207ENST00000539047 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms