RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 FZD6O60353 706 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 ITPKAP23677 461 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 ID3Q02535 119 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 MTMR3Q13615 1198 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 BHLHA9Q7RTU4 235 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 GJD3Q8N144 294 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 PBXIP1Q96AQ6 731 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 WDR89Q96FK6 387 aaPredicted RBP3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 C1QTNF3Q9BXJ4 246 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF576Q9H609 170 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 CCDC86Q9H6F5 360 aaKnown RBP3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 SSU72Q9NP77 194 aaKnown RBP3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 CCDC87Q9NVE4 849 aa3.02□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF862O60290 1169 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 NEFLP07196 543 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 HNRNPUQ00839 825 aaKnown RBP eCLIP3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 FKBP4Q02790 459 aaKnown RBP eCLIP3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 PTPN12Q05209 780 aaKnown RBP3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 KLF10Q13118 480 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 TTLL4Q14679 1199 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 KIF4BQ2VIQ3 1234 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 CPZQ66K79 652 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 ZC3H12CQ9C0D7 883 aaKnown RBP3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 EHD4Q9H223 541 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 KRT82Q9NSB4 513 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 SMPD4Q9NXE4 827 aa3.01□□□□□ -1.93
NPIPB4-209ENST00000538859 IGF2BP3O00425 579 aaKnown RBP eCLIP3□□□□□ -1.93
NPIPB4-209ENST00000538859 HCLS1P14317 486 aaPredicted RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF20P17024 532 aa3□□□□□ -1.93
NPIPB4-209ENST00000538859 SSFA2P28290 1259 aa3□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF157P51786 506 aaPredicted RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 SF3B2Q13435 895 aaKnown RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 SMN1Q16637 294 aaKnown RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 RPS26P11Q5JNZ5 115 aaPredicted RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 PHF6Q8IWS0 365 aaKnown RBP eCLIP3□□□□□ -1.93
NPIPB4-209ENST00000538859 TOP6BLQ8N6T0 577 aa3□□□□□ -1.93
NPIPB4-209ENST00000538859 TP53I13Q8NBR0 393 aaPredicted RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 GTF2IRD1Q9UHL9 959 aa3□□□□□ -1.93
NPIPB4-209ENST00000538859 ING1Q9UK53 422 aaPredicted RBP3□□□□□ -1.93
NPIPB4-209ENST00000538859 MTMR7Q9Y216 660 aa3□□□□□ -1.93
NPIPB4-209ENST00000538859 GSTP1P09211 210 aaKnown RBP2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 USPL1Q5W0Q7 1092 aa2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 NPM2Q86SE8 214 aaKnown RBP2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF605Q86T29 641 aa2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 ZNF552Q9H707 407 aaPredicted RBP2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 SP110Q9HB58 689 aa2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 PCDHGC5Q9Y5F6 944 aa2.99□□□□□ -1.93
NPIPB4-209ENST00000538859 TMEM238LA0A1B0GVL6 79 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 FZD7O75084 574 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 NEFMP07197 916 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 LMO1P25800 156 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 CSRP2Q16527 193 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 IRF2BP1Q8IU81 584 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 RNF214Q8ND24 703 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 KCNB2Q92953 911 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 ISL2Q96A47 359 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 RNF32Q9H0A6 362 aa2.98□□□□□ -1.93
NPIPB4-209ENST00000538859 GNAT3A8MTJ3 354 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 CPNE3O75131 537 aaKnown RBP2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 GADD45BO75293 160 aaPredicted RBP2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ABL1P00519 1130 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 KRTAP10-11P60412 298 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ERVK-24P63145 666 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 PPP2R3AQ06190 1150 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 FAAP100Q0VG06 881 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ZC3H12AQ5D1E8 599 aaKnown RBP2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 PRPF40BQ6NWY9 871 aaKnown RBP2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 SPRED1Q7Z699 444 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 NTN5Q8WTR8 489 aaPredicted RBP2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 MYLIPQ8WY64 445 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 SIGLEC10Q96LC7 697 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ATP13A1Q9HD20 1204 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ABCB6Q9NP58 842 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 PRDM10Q9NQV6 1147 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 TRAK1Q9UPV9 953 aa2.97□□□□□ -1.93
NPIPB4-209ENST00000538859 ONECUT2O95948 504 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 HPXP02790 462 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 TRHRP34981 398 aaPredicted RBP2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 CLCN7P51798 805 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 CDCP2Q5VXM1 449 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 TMEM132EQ6IEE7 984 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 TTC6Q86TZ1 520 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 PDZD3Q86UT5 571 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 NPAS4Q8IUM7 802 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 CCDC74AQ96AQ1 378 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 CCDC97Q96F63 343 aaPredicted RBP2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 CCDC120Q96HB5 630 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 ALPK1Q96QP1 1244 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 RBM15Q96T37 977 aaKnown RBP eCLIP2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 ARID3AQ99856 593 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 NPHS2Q9NP85 383 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 ANO2Q9NQ90 1003 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 TMEM39AQ9NV64 488 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 PPP4R2Q9NY27 417 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 BRPF3Q9ULD4 1205 aa2.96□□□□□ -1.94
NPIPB4-209ENST00000538859 TMEM88BA6NKF7 163 aa2.95□□□□□ -1.94
NPIPB4-209ENST00000538859 EOMESO95936 686 aa2.95□□□□□ -1.94
NPIPB4-209ENST00000538859 ITGB3P05106 788 aa2.95□□□□□ -1.94
NPIPB4-209ENST00000538859 RAC2P15153 192 aa2.95□□□□□ -1.94
NPIPB4-209ENST00000538859 ARNTP27540 789 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms