RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 IQCA1Q86XH1 822 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 BPIFA3Q9BQP9 254 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
LIMK1-208ENST00000538333 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 BECN2A8MW95 431 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 PKN1Q16512 942 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 SBK1Q52WX2 424 aa16.17■□□□□ 0.18
LIMK1-208ENST00000538333 ADRA2BP18089 450 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 NR5A1Q13285 461 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 LEMD3Q9Y2U8 911 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 NPHP1O15259 732 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 NLRP12P59046 1061 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 CATIPQ7Z7H3 387 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 ARPP21Q9UBL0 812 aaPredicted RBP16.16■□□□□ 0.18
LIMK1-208ENST00000538333 TUBE1Q9UJT0 475 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
LIMK1-208ENST00000538333 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 IGSF3O75054 1194 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 DDAH1O94760 285 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 PRR5LQ6MZQ0 368 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 ANKIB1Q9P2G1 1089 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
LIMK1-208ENST00000538333 AFF2P51816 1311 aa16.15■□□□□ 0.18
LIMK1-208ENST00000538333 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 CALM1P0DP23 149 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 CALM2P0DP24 149 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 CALM3P0DP25 149 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 CYP2D6P10635 497 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 XDHP47989 1333 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 C15orf52Q6ZUT6 534 aaKnown RBP16.14■□□□□ 0.17
LIMK1-208ENST00000538333 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
LIMK1-208ENST00000538333 PTPREP23469 700 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
LIMK1-208ENST00000538333 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 WDR66Q8TBY9 1149 aa16.14■□□□□ 0.17
LIMK1-208ENST00000538333 FBXO2Q9UK22 296 aaPredicted RBP16.14■□□□□ 0.17
LIMK1-208ENST00000538333 BIN1O00499 593 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 NMT2O60551 498 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 LRMPQ12912 555 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 TMTC3Q6ZXV5 915 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 PHF20Q9BVI0 1012 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 GRIN1Q05586 938 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
LIMK1-208ENST00000538333 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 KCNH3Q9ULD8 1083 aa16.13■□□□□ 0.17
LIMK1-208ENST00000538333 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
LIMK1-208ENST00000538333 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 GYS1P13807 737 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
LIMK1-208ENST00000538333 NCAPHQ15003 741 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 LONRF3Q496Y0 759 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 FAM47AQ5JRC9 791 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
LIMK1-208ENST00000538333 ELOA2Q8IYF1 753 aaPredicted RBP16.12■□□□□ 0.17
LIMK1-208ENST00000538333 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
LIMK1-208ENST00000538333 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
LIMK1-208ENST00000538333 USP17L8P0C7I0 530 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 XBP1P17861 261 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 PDE4BQ07343 736 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 NPY5RQ15761 445 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 GRIK5Q16478 980 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 CACTINQ8WUQ7 758 aaKnown RBP16.11■□□□□ 0.17
LIMK1-208ENST00000538333 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
LIMK1-208ENST00000538333 EP400Q96L91 3159 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 PNOCQ13519 176 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
LIMK1-208ENST00000538333 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
LIMK1-208ENST00000538333 ROBO3Q96MS0 1386 aa16.11■□□□□ 0.17
LIMK1-208ENST00000538333 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
LIMK1-208ENST00000538333 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
LIMK1-208ENST00000538333 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
LIMK1-208ENST00000538333 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
LIMK1-208ENST00000538333 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
LIMK1-208ENST00000538333 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
LIMK1-208ENST00000538333 TNFRSF25Q93038 417 aa16.1■□□□□ 0.17
LIMK1-208ENST00000538333 GPR101Q96P66 508 aaPredicted RBP16.1■□□□□ 0.17
LIMK1-208ENST00000538333 SRPRBQ9Y5M8 271 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms