RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TPD52P55327 224 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 TFAP4Q01664 338 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 EAPPQ56P03 285 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 CCDC110Q8TBZ0 833 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 NUP58Q9BVL2 599 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 TEKT1Q969V4 418 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 USP40Q9NVE5 1235 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 SYNRGQ9UMZ2 1314 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 NLRX1Q86UT6 975 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 TIGD1Q96MW7 591 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 USP19O94966 1318 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 CD19P15391 556 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 ZAP70P43403 619 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 CYP26C1Q6V0L0 522 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 MLKLQ8NB16 471 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 NSMCE1Q8WV22 266 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-205ENST00000538291 ERVV-2B6SEH9 535 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 DCUN1D2Q6PH85 259 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 HAUS2Q9NVX0 235 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 KRT19P08727 400 aa18.72■□□□□ 0.59
SCARB1-205ENST00000538291 ZNF496Q96IT1 587 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-205ENST00000538291 SEC62Q99442 399 aaKnown RBP18.71■□□□□ 0.59
SCARB1-205ENST00000538291 SNX14Q9Y5W7 946 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 ZEB2O60315 1214 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 GTF2IP78347 998 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 REXO1Q8N1G1 1221 aaKnown RBP18.71■□□□□ 0.59
SCARB1-205ENST00000538291 PKNOX2Q96KN3 472 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
SCARB1-205ENST00000538291 GLG1Q92896 1179 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-205ENST00000538291 ZMYND15Q9H091 742 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.591e-7■■■■■ 49.3
SCARB1-205ENST00000538291 WDR62O43379 1518 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 CAPN2P17655 700 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 TBC1D31Q96DN5 1066 aa18.71■□□□□ 0.59
SCARB1-205ENST00000538291 GNPTABQ3T906 1256 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 MFSD14BQ5SR56 506 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 SPOUT1Q5T280 376 aaKnown RBP18.7■□□□□ 0.58
SCARB1-205ENST00000538291 MYL10Q9BUA6 226 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 CTTNBP2NLQ9P2B4 639 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 SGSM2O43147 1006 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 GCNT3O95395 438 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 DYMQ7RTS9 669 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 PFDN4Q9NQP4 134 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCARB1-205ENST00000538291 OTUD6AQ7L8S5 288 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 MRPL44Q9H9J2 332 aaKnown RBP18.7■□□□□ 0.58
SCARB1-205ENST00000538291 STIM2Q9P246 746 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
SCARB1-205ENST00000538291 PRPF6O94906 941 aaKnown RBP18.7■□□□□ 0.58
SCARB1-205ENST00000538291 BCRP11274 1271 aa18.7■□□□□ 0.58
SCARB1-205ENST00000538291 EBAG9O00559 213 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 KRT40Q6A162 431 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 DPY19L2Q6NUT2 758 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 CABP7Q86V35 215 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 IPO4Q8TEX9 1081 aaKnown RBP18.69■□□□□ 0.58
SCARB1-205ENST00000538291 P4HA1P13674 534 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 BIRC2Q13490 618 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 PTPRKQ15262 1439 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 GIPC1O14908 333 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 GABPAQ06546 454 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 GPR162Q16538 588 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 DNAJC21Q5F1R6 531 aaKnown RBP18.69■□□□□ 0.58
SCARB1-205ENST00000538291 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 NAPGQ99747 312 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-205ENST00000538291 SHANK2Q9UPX8 1470 aa18.69■□□□□ 0.58
SCARB1-205ENST00000538291 ZWINTO95229 277 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 DCAF15Q66K64 600 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 PHKBQ93100 1093 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 CARD10Q9BWT7 1032 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 FAM184BQ9ULE4 1060 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 ITIH3Q06033 890 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-205ENST00000538291 ZBTB24O43167 697 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-205ENST00000538291 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
SCARB1-205ENST00000538291 C8orf74Q6P047 294 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 DAAM2Q86T65 1068 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 IWS1Q96ST2 819 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 ATP8A2Q9NTI2 1148 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 TBC1D7Q9P0N9 293 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 VPS18Q9P253 973 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 GAS7O60861 476 aa18.68■□□□□ 0.58
SCARB1-205ENST00000538291 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
SCARB1-205ENST00000538291 UTP11Q9Y3A2 253 aaKnown RBP18.67■□□□□ 0.58
SCARB1-205ENST00000538291 CTSWP56202 376 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 PPARAQ07869 468 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 KIF22Q14807 665 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 UTP14CQ5TAP6 766 aaKnown RBP18.67■□□□□ 0.58
SCARB1-205ENST00000538291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-205ENST00000538291 DEPTORQ8TB45 409 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 CCDC160A6NGH7 325 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms