RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 NFE2L3Q9Y4A8 694 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 RTL9Q8NET4 1388 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 MLKLQ8NB16 471 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 STRCQ7RTU9 1775 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 NPHP1O15259 732 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 MORC3Q14149 939 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 TRMT44Q8IYL2 757 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 SHISA4Q96DD7 197 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 ACSBG1Q96GR2 724 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
USP44-203ENST00000537435 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
USP44-203ENST00000537435 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 ZNF18P17022 549 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 GYG1P46976 350 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 SIK1P57059 783 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 TMEM139Q8IV31 216 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP44-203ENST00000537435 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
USP44-203ENST00000537435 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 FAM205CA6NFA0 338 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 ITPK1Q13572 414 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 ERCC6LQ2NKX8 1250 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 KANK3Q6NY19 840 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 TRIM65Q6PJ69 517 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
USP44-203ENST00000537435 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 BCL9LQ86UU0 1499 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 ARHGAP6O43182 974 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 XBP1P17861 261 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 TBX2Q13207 712 aaPredicted RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 PKN1Q16512 942 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 ENAHQ8N8S7 591 aaPredicted RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 CDC5LQ99459 802 aaKnown RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 RIOK1Q9BRS2 568 aaKnown RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 WTIPA6NIX2 430 aaPredicted RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 MED15Q96RN5 788 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 ZSCAN10Q96SZ4 725 aaPredicted RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
USP44-203ENST00000537435 DOT1LQ8TEK3 1739 aa16.37■□□□□ 0.21
USP44-203ENST00000537435 CYP2D7A0A087X1C5 515 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 PRDM1O75626 825 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 DHX58Q96C10 678 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 KRT2P35908 639 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 SPECC1LQ69YQ0 1117 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 SPATA20Q8TB22 786 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 BAG1Q99933 345 aaPredicted RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 PHF20Q9BVI0 1012 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
USP44-203ENST00000537435 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
USP44-203ENST00000537435 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
USP44-203ENST00000537435 FANCGO15287 622 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 PLCD1P51178 756 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 FUT2Q10981 343 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 TC2NQ8N9U0 490 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 V9GY48 417 aaPredicted RBP16.35■□□□□ 0.21
USP44-203ENST00000537435 COL4A1P02462 1669 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
USP44-203ENST00000537435 A0A087X0B3 334 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
USP44-203ENST00000537435 ADKP55263 362 aaKnown RBP16.35■□□□□ 0.21
USP44-203ENST00000537435 DDB1Q16531 1140 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 EPSTI1Q96J88 318 aa16.35■□□□□ 0.21
USP44-203ENST00000537435 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 ZHX1Q9UKY1 873 aaPredicted RBP16.34■□□□□ 0.21
USP44-203ENST00000537435 URI1O94763 535 aaPredicted RBP16.34■□□□□ 0.21
USP44-203ENST00000537435 ERCC5P28715 1186 aaPredicted RBP16.34■□□□□ 0.21
USP44-203ENST00000537435 AFMP43652 599 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 UBE4AQ14139 1066 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms