RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
CCDC60-203ENST00000536742 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
CCDC60-203ENST00000536742 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
CCDC60-203ENST00000536742 SIK1P57059 783 aa9.61□□□□□ -0.87
CCDC60-203ENST00000536742 ORC1Q13415 861 aa9.61□□□□□ -0.87
CCDC60-203ENST00000536742 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
CCDC60-203ENST00000536742 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
CCDC60-203ENST00000536742 VIRMAQ69YN4 1812 aaKnown RBP9.61□□□□□ -0.87
CCDC60-203ENST00000536742 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 GHRHP01286 108 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 MAPK8P45983 427 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 FBXO33Q7Z6M2 555 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 NCAPG2Q86XI2 1143 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 SLC17A8Q8NDX2 589 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 TTC9Q92623 222 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 MCOLN1Q9GZU1 580 aa9.6□□□□□ -0.87
CCDC60-203ENST00000536742 EREGO14944 169 aa9.59□□□□□ -0.87
CCDC60-203ENST00000536742 PRPF40AO75400 957 aaKnown RBP9.59□□□□□ -0.87
CCDC60-203ENST00000536742 LDHBP07195 334 aaKnown RBP9.59□□□□□ -0.87
CCDC60-203ENST00000536742 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
CCDC60-203ENST00000536742 EIF3AQ14152 1382 aaKnown RBP9.59□□□□□ -0.87
CCDC60-203ENST00000536742 ZBTB42B2RXF5 422 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 GIPC1O14908 333 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
CCDC60-203ENST00000536742 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 CD163Q86VB7 1156 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 MICALL1Q8N3F8 863 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 CEP120Q8N960 986 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 CCDC74AQ96AQ1 378 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 COL18A1P39060 1754 aa9.58□□□□□ -0.88
CCDC60-203ENST00000536742 ALBP02768 609 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 TGFB2P61812 414 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 NUTM2GQ5VZR2 741 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 NSUN5Q96P11 429 aaKnown RBP9.57□□□□□ -0.88
CCDC60-203ENST00000536742 PRDM6Q9NQX0 595 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 NLRP2Q9NX02 1062 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 NUP155O75694 1391 aa9.57□□□□□ -0.88
CCDC60-203ENST00000536742 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CCDC60-203ENST00000536742 TRIM28Q13263 835 aaKnown RBP9.56□□□□□ -0.88
CCDC60-203ENST00000536742 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
CCDC60-203ENST00000536742 ELMSAN1Q6PJG2 1045 aa9.56□□□□□ -0.88
CCDC60-203ENST00000536742 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
CCDC60-203ENST00000536742 KANSL3Q9P2N6 904 aa9.56□□□□□ -0.88
CCDC60-203ENST00000536742 WDR17Q8IZU2 1322 aa9.56□□□□□ -0.88
CCDC60-203ENST00000536742 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 GLTPD2A6NH11 291 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 LILRB5O75023 590 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 ADAM23O75077 832 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 SMNDC1O75940 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC60-203ENST00000536742 GCP02774 474 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 EIF2AK2P19525 551 aaKnown RBP9.55□□□□□ -0.88
CCDC60-203ENST00000536742 CHRNA4P43681 627 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 TRAK1Q9UPV9 953 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 YTHDC2Q9H6S0 1430 aaKnown RBP9.55□□□□□ -0.88
CCDC60-203ENST00000536742 PPLO60437 1756 aa9.55□□□□□ -0.88
CCDC60-203ENST00000536742 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
CCDC60-203ENST00000536742 CPB1P15086 417 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 FXR1P51114 621 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC60-203ENST00000536742 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 CARD10Q9BWT7 1032 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 PBX4Q9BYU1 374 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 PRR36Q9H6K5 1346 aa9.54□□□□□ -0.88
CCDC60-203ENST00000536742 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
CCDC60-203ENST00000536742 SOX10P56693 466 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 PERM1Q5SV97 790 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 PSAPL1Q6NUJ1 521 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 TMEM102Q8N9M5 508 aaPredicted RBP9.53□□□□□ -0.88
CCDC60-203ENST00000536742 PLD4Q96BZ4 506 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 LPIN3Q9BQK8 851 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 NPHS2Q9NP85 383 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 DZANK1Q9NVP4 752 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 NAGPAQ9UK23 515 aa9.53□□□□□ -0.88
CCDC60-203ENST00000536742 ABCC6O95255 1503 aa9.52□□□□□ -0.88
CCDC60-203ENST00000536742 J3QW42 95 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 FURINP09958 794 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 GNA15P30679 374 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 PEAR1Q5VY43 1037 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-203ENST00000536742 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 OSMRQ99650 979 aa9.52□□□□□ -0.89
CCDC60-203ENST00000536742 BHLHE41Q9C0J9 482 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-203ENST00000536742 JPH1Q9HDC5 661 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-203ENST00000536742 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-203ENST00000536742 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
CCDC60-203ENST00000536742 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 A0A1W2PP55 124 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms