RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZBTB21Q9ULJ3 1066 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 TTC41PQ6P2S7 1318 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 HLA-DOAP06340 250 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 SPP2Q13103 211 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 GADL1Q6ZQY3 521 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 CRNKL1Q9BZJ0 848 aaKnown RBP19.81■□□□□ 0.76
ATL3-202ENST00000535789 SERPINB13Q9UIV8 391 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 A0A0G2JMZ2 1700 aa19.81■□□□□ 0.76
ATL3-202ENST00000535789 MYH4Q9Y623 1939 aa19.8■□□□□ 0.76
ATL3-202ENST00000535789 USP17L5A8MUK1 530 aa19.8■□□□□ 0.76
ATL3-202ENST00000535789 BCRP11274 1271 aa19.8■□□□□ 0.76
ATL3-202ENST00000535789 PKN2Q16513 984 aaKnown RBP19.8■□□□□ 0.76
ATL3-202ENST00000535789 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
ATL3-202ENST00000535789 ASNSP08243 561 aa19.79■□□□□ 0.76
ATL3-202ENST00000535789 MX1P20591 662 aa19.79■□□□□ 0.76
ATL3-202ENST00000535789 HMGCS2P54868 508 aa19.79■□□□□ 0.76
ATL3-202ENST00000535789 LACTBP83111 547 aaPredicted RBP19.79■□□□□ 0.76
ATL3-202ENST00000535789 SLC44A5Q8NCS7 719 aa19.79■□□□□ 0.76
ATL3-202ENST00000535789 AGTPBP1Q9UPW5 1226 aa19.79■□□□□ 0.76
ATL3-202ENST00000535789 COL11A1P12107 1806 aaPredicted RBP19.79■□□□□ 0.76
ATL3-202ENST00000535789 KIAA0100Q14667 2235 aaKnown RBP19.78■□□□□ 0.76
ATL3-202ENST00000535789 CYP2D7A0A087X1C5 515 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 IGHDP01880 384 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 GUCY1A2P33402 732 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 MTMR2Q13614 643 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 SH3D19Q5HYK7 790 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 FASTKD5Q7L8L6 764 aaKnown RBP19.78■□□□□ 0.76
ATL3-202ENST00000535789 PROCA1Q8NCQ7 364 aaPredicted RBP19.78■□□□□ 0.76
ATL3-202ENST00000535789 OSBP2Q969R2 916 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 GPATCH3Q96I76 525 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 PARK7Q99497 189 aaKnown RBP19.78■□□□□ 0.76
ATL3-202ENST00000535789 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 EFCC1Q9HA90 598 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 MCM9Q9NXL9 1143 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 SLC45A1Q9Y2W3 748 aa19.78■□□□□ 0.76
ATL3-202ENST00000535789 ECM2O94769 699 aaPredicted RBP19.77■□□□□ 0.76
ATL3-202ENST00000535789 GH2P01242 217 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 SOX10P56693 466 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 IRX6P78412 446 aaPredicted RBP19.77■□□□□ 0.76
ATL3-202ENST00000535789 ANKRD45Q5TZF3 282 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 TTC6Q86TZ1 520 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 SMC5Q8IY18 1101 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 GCC1Q96CN9 775 aa19.77■□□□□ 0.76
ATL3-202ENST00000535789 M0R2C6 588 aa19.76■□□□□ 0.75
ATL3-202ENST00000535789 DYNLL2Q96FJ2 89 aa19.76■□□□□ 0.75
ATL3-202ENST00000535789 TRIM34Q9BYJ4 488 aa19.76■□□□□ 0.75
ATL3-202ENST00000535789 TBC1D2Q9BYX2 928 aa19.76■□□□□ 0.75
ATL3-202ENST00000535789 POLR3DP05423 398 aaPredicted RBP19.75■□□□□ 0.75
ATL3-202ENST00000535789 TRIM47Q96LD4 638 aa19.75■□□□□ 0.75
ATL3-202ENST00000535789 STRBPQ96SI9 672 aaKnown RBP19.75■□□□□ 0.75
ATL3-202ENST00000535789 SEC62Q99442 399 aaKnown RBP19.75■□□□□ 0.75
ATL3-202ENST00000535789 AS3MTQ9HBK9 375 aa19.75■□□□□ 0.75
ATL3-202ENST00000535789 EPB41L4AQ9HCS5 686 aaPredicted RBP19.75■□□□□ 0.75
ATL3-202ENST00000535789 PTCH2Q9Y6C5 1203 aa19.75■□□□□ 0.75
ATL3-202ENST00000535789 RNF113AO15541 343 aaKnown RBP19.74■□□□□ 0.75
ATL3-202ENST00000535789 GLRX3O76003 335 aaKnown RBP19.74■□□□□ 0.75
ATL3-202ENST00000535789 NEFLP07196 543 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 BACE1P56817 501 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 AAMPQ13685 434 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 ZSCAN25Q6NSZ9 544 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 APPBP2Q92624 585 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 ATP8A2Q9NTI2 1148 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 GINM1Q9NU53 330 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 STAP2Q9UGK3 403 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 SLC4A4Q9Y6R1 1079 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 LAMA4Q16363 1823 aa19.74■□□□□ 0.75
ATL3-202ENST00000535789 RGS19P49795 217 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 PDE1AP54750 535 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 ABCB5Q2M3G0 1257 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 CERKLQ49MI3 558 aaPredicted RBP19.73■□□□□ 0.75
ATL3-202ENST00000535789 C12orf60Q5U649 245 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 ACER1Q8TDN7 264 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 LNPKQ9C0E8 428 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 EMILIN3Q9NT22 766 aa19.73■□□□□ 0.75
ATL3-202ENST00000535789 GSG1L2A8MUP6 293 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 USP17L12C9JPN9 530 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 USP17L21D6R901 530 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 ERC2O15083 957 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 GPAA1O43292 621 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 PEX10O60683 326 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 CTR9Q6PD62 1173 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 POTEEQ6S8J3 1075 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 CLEC10AQ8IUN9 316 aa19.72■□□□□ 0.75
ATL3-202ENST00000535789 ASCC2Q9H1I8 757 aaPredicted RBP19.72■□□□□ 0.75
ATL3-202ENST00000535789 ROBO3Q96MS0 1386 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 FOXP2O15409 715 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 OSBPP22059 807 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 PSMC4P43686 418 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 SEPT2Q15019 361 aa19.71■□□□□ 0.75
ATL3-202ENST00000535789 A0A1W2PRG0 241 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 AKR1B1P15121 316 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 RAB3GAP1Q15042 981 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 ZMYM1Q5SVZ6 1142 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 C16orf86Q6ZW13 317 aa19.7■□□□□ 0.74
ATL3-202ENST00000535789 ANKRD13CQ8N6S4 541 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms