RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 BNC2Q6ZN30 1099 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-202ENST00000535689 KIAA1211Q6ZU35 1233 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 UBASH3BQ8TF42 649 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 UTP4Q969X6 686 aaKnown RBP4.94□□□□□ -1.62
SNHG1-202ENST00000535689 GAL3ST3Q96A11 431 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 EAF1Q96JC9 268 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-202ENST00000535689 DHRS1Q96LJ7 313 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 TM9SF2Q99805 663 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 TINF2Q9BSI4 451 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 EHMT1Q9H9B1 1298 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 USP35Q9P2H5 1018 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 EFR3BQ9Y2G0 817 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 PRR36Q9H6K5 1346 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 PHLDB1Q86UU1 1377 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 TNIKQ9UKE5 1360 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 PRAMEF27A3QJZ7 478 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 TMPRSS2O15393 492 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 ZNF862O60290 1169 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 ADAM11O75078 769 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 NAT2P11245 290 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 SELPP16109 830 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 GARTP22102 1010 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 CAP2P40123 477 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 NASPP49321 788 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 TMEM201Q5SNT2 666 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 INTS3Q68E01 1043 aaKnown RBP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 Q6ZS46 218 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 ASXL2Q76L83 1435 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 CYFIP1Q7L576 1253 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 CLEC10AQ8IUN9 316 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 SMYD4Q8IYR2 804 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 RBBP8NLQ8NC74 664 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-202ENST00000535689 PLPPR2Q96GM1 343 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 FANCD2OSQ96PS1 177 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 UBP1Q9NZI7 540 aa4.93□□□□□ -1.62
SNHG1-202ENST00000535689 ABCC2Q92887 1545 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 GFRA2O00451 464 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 TLR3O15455 904 aaKnown RBP4.92□□□□□ -1.62
SNHG1-202ENST00000535689 TIAF1O95411 115 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 PROCP04070 461 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 CHRNA4P43681 627 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 IREB2P48200 963 aaKnown RBP4.92□□□□□ -1.62
SNHG1-202ENST00000535689 MBTPS1Q14703 1052 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 CPSF6Q16630 551 aaKnown RBP eCLIP4.92□□□□□ -1.62
SNHG1-202ENST00000535689 BBS9Q3SYG4 887 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 HGSNATQ68CP4 663 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 GK5Q6ZS86 529 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 STK35Q8TDR2 534 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 SPOCK3Q9BQ16 436 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 TRIM55Q9BYV6 548 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 KCNF1Q9H3M0 494 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 GSX1Q9H4S2 264 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-202ENST00000535689 BRMS1Q9HCU9 246 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 KCNK4Q9NYG8 393 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 GMIPQ9P107 970 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
SNHG1-202ENST00000535689 SETD1BQ9UPS6 1966 aaKnown RBP4.92□□□□□ -1.62
SNHG1-202ENST00000535689 FAM95CA0A1B0GW59 222 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 TM4SF5O14894 197 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 LRIG2O94898 1065 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 GBP1P32455 592 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 ETV3P41162 512 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 CYP27C1Q4G0S4 372 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 LRFN4Q6PJG9 635 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 C12orf40Q86WS4 652 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 MCATQ8IVS2 390 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 MRPL41Q8IXM3 137 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 DZIP1LQ8IYY4 767 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 TAB3Q8N5C8 712 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 C19orf47Q8N9M1 422 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 FAM46AQ96IP4 442 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 MYRFLQ96LU7 910 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 CCDC74BQ96LY2 380 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 METTL22Q9BUU2 404 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 GINM1Q9NU53 330 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 ZNRF3Q9ULT6 936 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 UHRF1BP1LA0JNW5 1464 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 CUL7Q14999 1698 aa4.91□□□□□ -1.62
SNHG1-202ENST00000535689 PPRC1Q5VV67 1664 aaKnown RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 TTBK1Q5TCY1 1321 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-202ENST00000535689 MAP3K4Q9Y6R4 1608 aa4.9□□□□□ -1.62
SNHG1-202ENST00000535689 C1QTNF9BB2RNN3 333 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 F6X3S4 739 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 HTR3BO95264 441 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 BMP3P12645 472 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 RAG1P15918 1043 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 NOS3P29474 1203 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 GRK4P32298 578 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 TNNI2P48788 182 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 RING1Q06587 406 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 TTLL4Q14679 1199 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 NFE2L2Q16236 605 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 DUSP27Q5VZP5 1158 aa4.9□□□□□ -1.63
SNHG1-202ENST00000535689 SHISA2Q6UWI4 295 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms