RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 SLC35G1Q2M3R5 365 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 C12orf60Q5U649 245 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 CLEC10AQ8IUN9 316 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
LINC00943-203ENST00000535544 WDR66Q8TBY9 1149 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 ZNF396Q96N95 335 aaPredicted RBP10.64□□□□□ -0.71
LINC00943-203ENST00000535544 MAP3K14Q99558 947 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
LINC00943-203ENST00000535544 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 BBOX1O75936 387 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 PTPAQ15257 358 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 FMR1NBQ8N0W7 255 aaPredicted RBP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 DBNDD1Q9H9R9 158 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 PCDHB6Q9Y5E3 794 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 BIN1O00499 593 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 PLSCR1O15162 318 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 IL1R1P14778 569 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 PICALMQ13492 652 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 SHC4Q6S5L8 630 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 USP49Q70CQ1 688 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 C17orf53Q8N3J3 647 aaPredicted RBP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 ANP32BQ92688 251 aaKnown RBP10.63□□□□□ -0.71
LINC00943-203ENST00000535544 ATP8A2Q9NTI2 1148 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
LINC00943-203ENST00000535544 FOXN1O15353 648 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 MMP1P03956 469 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CCDC192P0DO97 292 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 RXRBP28702 533 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 RHBDL3P58872 404 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 ADALQ6DHV7 355 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 SPC24Q8NBT2 197 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CABP5Q9NP86 173 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 KIAA1551Q9HCM1 1747 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CACNB3P54284 484 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 ADAMTSL1Q8N6G6 1762 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CDKL5O76039 1030 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 SLC39A14Q15043 492 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CPLX2Q6PUV4 134 aaKnown RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 IQCA1Q86XH1 822 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 CRAMP1Q96RY5 1269 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 TTC12Q9H892 705 aaPredicted RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
LINC00943-203ENST00000535544 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
LINC00943-203ENST00000535544 LETM1O95202 739 aaPredicted RBP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 PFKFB1P16118 471 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 NPY5RQ15761 445 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 ZFPM1Q8IX07 1006 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 SP8Q8IXZ3 490 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 TEX11Q8IYF3 940 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 NLGN1Q8N2Q7 840 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 PDS5AQ29RF7 1337 aaKnown RBP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 ZNF202O95125 648 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 EIF6P56537 245 aaKnown RBP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 DEFB132Q7Z7B7 95 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 NOSTRINQ8IVI9 506 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 MRPS27Q92552 414 aaKnown RBP10.61□□□□□ -0.71
LINC00943-203ENST00000535544 MKNK2Q9HBH9 465 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 STX8Q9UNK0 236 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 DAGLAQ9Y4D2 1042 aa10.61□□□□□ -0.71
LINC00943-203ENST00000535544 ORC4O43929 436 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 RASA1P20936 1047 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 ZNF772Q68DY9 489 aaPredicted RBP10.6□□□□□ -0.71
LINC00943-203ENST00000535544 CCDC73Q6ZRK6 1079 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 RASGRP4Q8TDF6 673 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 SDF4Q9BRK5 362 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 ARPP21Q9UBL0 812 aaPredicted RBP10.6□□□□□ -0.71
LINC00943-203ENST00000535544 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 DEXIO95424 95 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 ZNF165P49910 485 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 PPP4CP60510 307 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 TRIM29Q14134 588 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 C15orf52Q6ZUT6 534 aaKnown RBP10.6□□□□□ -0.71
LINC00943-203ENST00000535544 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
LINC00943-203ENST00000535544 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 TMTC2Q8N394 836 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 SCN9AQ15858 1988 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 FLT1P17948 1338 aa10.6□□□□□ -0.71
LINC00943-203ENST00000535544 COL11A2P13942 1736 aaPredicted RBP10.59□□□□□ -0.71
LINC00943-203ENST00000535544 CYTH3O43739 400 aa10.59□□□□□ -0.71
LINC00943-203ENST00000535544 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms