RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 FANCBQ8NB91 859 aa27.73■■■□□ 2.03
PTPMT1-205ENST00000534775 TCP11L1Q9NUJ3 509 aa27.73■■■□□ 2.03
PTPMT1-205ENST00000534775 TCHHQ07283 1943 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 TSPY3P0CV98 308 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 TSPY8P0CW00 308 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 IFNAR1P17181 557 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 PTGER2P43116 358 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 CDK8P49336 464 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 NTRK3Q16288 839 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 RSBN1LQ6PCB5 846 aaPredicted RBP27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 FERMT3Q86UX7 667 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 TMEM87AQ8NBN3 555 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 NUP133Q8WUM0 1156 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 C8orf76Q96K31 380 aa27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 DDX49Q9Y6V7 483 aaKnown RBP27.72■■■□□ 2.03
PTPMT1-205ENST00000534775 SSRP1Q08945 709 aaKnown RBP27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 KLHL40Q2TBA0 621 aa27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 DGKHQ86XP1 1220 aa27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 KLHL34Q8N239 644 aa27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 OSBPL5Q9H0X9 879 aaPredicted RBP27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 TAOK3Q9H2K8 898 aa27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 ZNRF3Q9ULT6 936 aa27.71■■■□□ 2.03
PTPMT1-205ENST00000534775 VIL1P09327 827 aaKnown RBP27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 RASA1P20936 1047 aa27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 RESTQ13127 1097 aa27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 WASF1Q92558 559 aa27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 DDX4Q9NQI0 724 aaKnown RBP27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 RBM28Q9NW13 759 aaKnown RBP27.7■■■□□ 2.03
PTPMT1-205ENST00000534775 PPFIA3O75145 1194 aa27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 NCLP19338 710 aaKnown RBP27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 KRT85P78386 507 aa27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 TRIM22Q8IYM9 498 aa27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 ANKS1AQ92625 1134 aa27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 CNPY2Q9Y2B0 182 aa27.7■■■□□ 2.02
PTPMT1-205ENST00000534775 COL4A5P29400 1685 aa27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 NPM3O75607 178 aaKnown RBP27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 FMNL1O95466 1100 aaPredicted RBP27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 HLA-DOAP06340 250 aa27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 DNM1Q05193 864 aaKnown RBP27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 SLC44A5Q8NCS7 719 aa27.69■■■□□ 2.02
PTPMT1-205ENST00000534775 NMT2O60551 498 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 MBD3O95983 291 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 FOSBP53539 338 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 GSE1Q14687 1217 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 IDI2Q9BXS1 227 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 SWAP70Q9UH65 585 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 HDAC9Q9UKV0 1011 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 MYH8P13535 1937 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 MYH15Q9Y2K3 1946 aa27.68■■■□□ 2.02
PTPMT1-205ENST00000534775 PSMD14O00487 310 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 RAD17O75943 681 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 TROAPQ12815 778 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 USP48Q86UV5 1035 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 FBXO18Q8NFZ0 1043 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 PHKBQ93100 1093 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 ALG1Q9BT22 464 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 KAT14Q9H8E8 782 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 CFAP100Q494V2 611 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 SLC26A6Q9BXS9 759 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 DHX36Q9H2U1 1008 aaKnown RBP27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 TAOK2Q9UL54 1235 aa27.67■■■□□ 2.02
PTPMT1-205ENST00000534775 GABPAQ06546 454 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 RCSD1Q6JBY9 416 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 NEDD1Q8NHV4 660 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 CTCFLQ8NI51 663 aaPredicted RBP27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 JDP2Q8WYK2 163 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 IL17RBQ9NRM6 502 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 SERPINB13Q9UIV8 391 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 BCS1LQ9Y276 419 aa27.66■■■□□ 2.02
PTPMT1-205ENST00000534775 CRACR2BQ8N4Y2 399 aaPredicted RBP27.65■■■□□ 2.02
PTPMT1-205ENST00000534775 GMLQ99445 158 aa27.65■■■□□ 2.02
PTPMT1-205ENST00000534775 GDPD2Q9HCC8 539 aa27.65■■■□□ 2.02
PTPMT1-205ENST00000534775 ARFGEF1Q9Y6D6 1849 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 FIBPO43427 364 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 TRIM29Q14134 588 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 OGFOD1Q8N543 542 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 AGBL3Q8NEM8 1001 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 MAP3K14Q99558 947 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 SCAND2PQ9GZW5 306 aaPredicted RBP27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 EHD4Q9H223 541 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 LTBP3Q9NS15 1303 aa27.64■■■□□ 2.02
PTPMT1-205ENST00000534775 GUCY1B3Q02153 619 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 NFIAQ12857 509 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 ATL3Q6DD88 541 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 NBPF11Q86T75 865 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 RNF26Q9BY78 433 aaPredicted RBP27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 PLIN4Q96Q06 1357 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 DEXIO95424 95 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 KIF5BP33176 963 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 CFAP45Q9UL16 551 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 PCDHAC2Q9Y5I4 1007 aa27.63■■■□□ 2.01
PTPMT1-205ENST00000534775 MYH6P13533 1939 aa27.62■■■□□ 2.01
PTPMT1-205ENST00000534775 NFKBIEO00221 500 aa27.62■■■□□ 2.01
PTPMT1-205ENST00000534775 AKAP17AQ02040 695 aaKnown RBP27.62■■■□□ 2.01
PTPMT1-205ENST00000534775 SPON1Q9HCB6 807 aa27.62■■■□□ 2.01
PTPMT1-205ENST00000534775 COL2A1P02458 1487 aaPredicted RBP27.61■■■□□ 2.01
PTPMT1-205ENST00000534775 PNMA1Q8ND90 353 aa27.61■■■□□ 2.01
PTPMT1-205ENST00000534775 GZF1Q9H116 711 aaPredicted RBP27.61■■■□□ 2.01
PTPMT1-205ENST00000534775 TMOD2Q9NZR1 351 aa27.61■■■□□ 2.01
PTPMT1-205ENST00000534775 ELP1O95163 1332 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms