RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RALYLQ86SE5 291 aaKnown RBP21.77■■□□□ 1.08
SMPD1-210ENST00000534405 TBC1D10CQ8IV04 446 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 FAM177A1Q8N128 213 aaPredicted RBP21.77■■□□□ 1.08
SMPD1-210ENST00000534405 CNNM1Q9NRU3 951 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 TUBB4BP68371 445 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 PRPF38AQ8NAV1 312 aaKnown RBP21.77■■□□□ 1.08
SMPD1-210ENST00000534405 AFAP1L1Q8TED9 768 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 CNKSR2Q8WXI2 1034 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 FAXDC2Q96IV6 333 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 PNKPQ96T60 521 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 ANKRD18BA2A2Z9 1011 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 IRS4O14654 1257 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-210ENST00000534405 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-210ENST00000534405 MRPS27Q92552 414 aaKnown RBP21.76■■□□□ 1.07
SMPD1-210ENST00000534405 CUTAO60888 179 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 NDUFA8P51970 172 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 NEDD9Q14511 834 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 ADALQ6DHV7 355 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 CYB5R4Q7L1T6 521 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 FAM169AQ9Y6X4 670 aa21.76■■□□□ 1.07
SMPD1-210ENST00000534405 IRF6O14896 467 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 ELF1P32519 619 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 PHKA1P46020 1223 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMPD1-210ENST00000534405 TMEM139Q8IV31 216 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 FBXW7Q969H0 707 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 CLIC6Q96NY7 704 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMPD1-210ENST00000534405 GBP3Q9H0R5 595 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 SUGCTQ9HAC7 445 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 KAT6BQ8WYB5 2073 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 MYSM1Q5VVJ2 828 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 BTG4Q9NY30 223 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 TRMT112Q9UI30 125 aaKnown RBP21.75■■□□□ 1.07
SMPD1-210ENST00000534405 MCM8Q9UJA3 840 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 NEDD4P46934 1319 aa21.75■■□□□ 1.07
SMPD1-210ENST00000534405 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 C4BP0C0L5 1744 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 CPLX1O14810 134 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 SHOX2O60902 331 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 PHACTR2O75167 634 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 IDH1O75874 414 aaKnown RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 CPLX2Q6PUV4 134 aaKnown RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 AIFM3Q96NN9 605 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 JPH2Q9BR39 696 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 SENP2Q9HC62 589 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 LRP6O75581 1613 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 PDE8BO95263 885 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 RXRAP19793 462 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 FANCCQ00597 558 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 NCAPHQ15003 741 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 STK38Q15208 465 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 TMED8Q6PL24 325 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 CEP112Q8N8E3 955 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 ZNF512BQ96KM6 892 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-210ENST00000534405 WWC3Q9ULE0 1092 aa21.74■■□□□ 1.07
SMPD1-210ENST00000534405 MYH3P11055 1940 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 A0A1W2PQ27 194 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 A0A1W2PQ64 194 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 A0A1W2PQD8 194 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 AARSP49588 968 aaKnown RBP eCLIP21.73■■□□□ 1.07
SMPD1-210ENST00000534405 DPCR1Q3MIW9 517 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 CCDC102BQ68D86 513 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 POLR3EQ9NVU0 708 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 ATRNO75882 1429 aa21.73■■□□□ 1.07
SMPD1-210ENST00000534405 RNF40O75150 1001 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 PRPF6O94906 941 aaKnown RBP21.72■■□□□ 1.07
SMPD1-210ENST00000534405 ERCC3P19447 782 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 KIF23Q02241 960 aaPredicted RBP21.72■■□□□ 1.07
SMPD1-210ENST00000534405 HELBQ8NG08 1087 aaPredicted RBP21.72■■□□□ 1.07
SMPD1-210ENST00000534405 TBC1D2BQ9UPU7 963 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 UBN2Q6ZU65 1347 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 BCL9O00512 1426 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 CABS1Q96KC9 395 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 VIPAS39Q9H9C1 493 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 ANKRD36CQ5JPF3 1778 aa21.72■■□□□ 1.07
SMPD1-210ENST00000534405 EBAG9O00559 213 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 SPTLC2O15270 562 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 YEATS4O95619 227 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 PDE6AP16499 860 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 INCENPQ9NQS7 918 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 TCRBV5S4A2TA0A5A2 114 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 WDHD1O75717 1129 aaPredicted RBP21.71■■□□□ 1.07
SMPD1-210ENST00000534405 TUBBP07437 444 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 UBE3CQ15386 1083 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 SF3A1Q15459 793 aaKnown RBP21.71■■□□□ 1.07
SMPD1-210ENST00000534405 ISM2Q6H9L7 571 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 BRAPQ7Z569 592 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 SDF4Q9BRK5 362 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 ANGEL1Q9UNK9 670 aaKnown RBP21.71■■□□□ 1.07
SMPD1-210ENST00000534405 NUP98P52948 1817 aa21.71■■□□□ 1.07
SMPD1-210ENST00000534405 SNAP23O00161 211 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-210ENST00000534405 INPP5BP32019 993 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 KCNG4Q8TDN1 519 aa21.7■■□□□ 1.06
SMPD1-210ENST00000534405 SLIT2O94813 1529 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms