RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NAPBQ9H115 298 aa12.96□□□□□ -0.33
CCDC90B-218ENST00000533761 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
CCDC90B-218ENST00000533761 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.33
CCDC90B-218ENST00000533761 ZNF213O14771 459 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 TRDNQ13061 729 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 ALX1Q15699 326 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 MIGA1Q8NAN2 632 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CCDC90B-218ENST00000533761 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 COL9A1P20849 921 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 TDO2P48775 406 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 ZNF784Q8NCA9 323 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 TSR3Q9UJK0 312 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 SLC4A4Q9Y6R1 1079 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 K7ELQ4 463 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 FGAP02671 866 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 CHGBP05060 677 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 NT5C2P49902 561 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 TNFAIP1Q13829 316 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 SLFNL1Q499Z3 407 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 ANGEL2Q5VTE6 544 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 TBC1D2Q9BYX2 928 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 RNF41Q9H4P4 317 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 ATP8A2Q9NTI2 1148 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
CCDC90B-218ENST00000533761 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 CYP21A2P08686 494 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 PCP11498 1178 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 NEK1Q96PY6 1258 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 RIOK1Q9BRS2 568 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 ZNF70Q9UC06 446 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-218ENST00000533761 TNNI2P48788 182 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 RHBDL3P58872 404 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 FGD1P98174 961 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 SULF1Q8IWU6 871 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
CCDC90B-218ENST00000533761 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 TEX11Q8IYF3 940 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 UPF3BQ9BZI7 483 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 ARPP21Q9UBL0 812 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 ASTN2O75129 1339 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 ECM29Q5VYK3 1845 aa12.91□□□□□ -0.34
CCDC90B-218ENST00000533761 WDHD1O75717 1129 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 USP5P45974 858 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 CACNB3P54284 484 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 CDC37L1Q7L3B6 337 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 KRT26Q7Z3Y9 468 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 FAM83AQ86UY5 434 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
CCDC90B-218ENST00000533761 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 TCP10L2B9ZVM9 353 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 ENTPD3O75355 529 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 TOMM70O94826 608 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 RPS6KB1P23443 525 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 TGFBRAP1Q8WUH2 860 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 ZSCAN31Q96LW9 406 aaPredicted RBP12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 KRT23Q9C075 422 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 DEFB129Q9H1M3 183 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 PPP2R3BQ9Y5P8 575 aa12.9□□□□□ -0.35
CCDC90B-218ENST00000533761 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 E7EWF7 191 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 MCM5P33992 734 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 TCP10Q12799 353 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms