RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 USP2O75604 605 aaPredicted RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 CTDSPL2Q05D32 466 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 LRRFIP1Q32MZ4 808 aaKnown RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 C12orf60Q5U649 245 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 CLEC10AQ8IUN9 316 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 ATP8A2Q9NTI2 1148 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 PAPPA2Q9BXP8 1791 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 BAZ2AQ9UIF9 1905 aaKnown RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 UBE2Q2LH0YL09 131 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 HIP1O00291 1037 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 PRDM1O75626 825 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 APPP05067 770 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 SHMT1P34896 483 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 TDO2P48775 406 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 MAP3K10Q02779 954 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 FSTL1Q12841 308 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 ALX1Q15699 326 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 STOX1Q6ZVD7 989 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 TICAM2Q86XR7 235 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
TRIM49-202ENST00000532501 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
TRIM49-202ENST00000532501 ROBO3Q96MS0 1386 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 MINDY4BA8MYZ0 360 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 GDF11O95390 407 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 POLR3DP05423 398 aaPredicted RBP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 GJA5P36382 358 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 TNNI2P48788 182 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 SBK1Q52WX2 424 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 DSCC1Q9BVC3 393 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 NAPBQ9H115 298 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 GBA2Q9HCG7 927 aaPredicted RBP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
TRIM49-202ENST00000532501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM49-202ENST00000532501 NEDD4P46934 1319 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 CYP21A2P08686 494 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 AKR1B1P15121 316 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 GNAT2P19087 354 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 GUCY1A2P33402 732 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 PBX2P40425 430 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 PPARAQ07869 468 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 LDLRAD1Q5T700 205 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 GIMAP6Q6P9H5 292 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 CERS3Q8IU89 383 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 MAP4K1Q92918 833 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
TRIM49-202ENST00000532501 KLRG1Q96E93 195 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 WRNIP1Q96S55 665 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ZNF112Q9UJU3 913 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ANGEL1Q9UNK9 670 aaKnown RBP9.54□□□□□ -0.88
TRIM49-202ENST00000532501 SNCAIPQ9Y6H5 919 aa9.54□□□□□ -0.88
TRIM49-202ENST00000532501 ZMYM6O95789 1325 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 OTOFQ9HC10 1997 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 RASA1P20936 1047 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 CDK8P49336 464 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 MFAP1P55081 439 aaKnown RBP9.53□□□□□ -0.88
TRIM49-202ENST00000532501 VGLL4Q14135 290 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 SAPCD2Q86UD0 394 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 RUFY2Q8WXA3 655 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 EHD4Q9H223 541 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM49-202ENST00000532501 PI4KBQ9UBF8 816 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 ARPP21Q9UBL0 812 aaPredicted RBP9.53□□□□□ -0.88
TRIM49-202ENST00000532501 SERPINB13Q9UIV8 391 aa9.53□□□□□ -0.88
TRIM49-202ENST00000532501 MYH1P12882 1939 aa9.52□□□□□ -0.88
TRIM49-202ENST00000532501 SLC27A2O14975 620 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 TBC1D12O60347 775 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
TRIM49-202ENST00000532501 VASPP50552 380 aaPredicted RBP9.52□□□□□ -0.89
TRIM49-202ENST00000532501 DGKZQ13574 1117 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 NECTIN1Q15223 517 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 SUPT20HL1Q3ZLR7 823 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 TATDN1Q6P1N9 297 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 CASC1Q6TDU7 716 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 ZNF341Q9BYN7 854 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
TRIM49-202ENST00000532501 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
TRIM49-202ENST00000532501 LAMB1P07942 1786 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 TMEM88BA6NKF7 163 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 NMT2O60551 498 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 EIF5BO60841 1220 aaKnown RBP9.51□□□□□ -0.89
TRIM49-202ENST00000532501 RGS20O76081 388 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 GH2P01242 217 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 HLA-DOAP06340 250 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 APLP1P51693 650 aa9.51□□□□□ -0.89
TRIM49-202ENST00000532501 HUNKP57058 714 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms