RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 AS3MTQ9HBK9 375 aa18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 DCP1AQ9NPI6 582 aaPredicted RBP18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 ATP8A2Q9NTI2 1148 aa18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 BRCA2P51587 3418 aa18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 GLRX3O76003 335 aaKnown RBP18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 SMC5Q8IY18 1101 aa18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.65■□□□□ 0.58
CCDC90B-215ENST00000529745 RBBP6Q7Z6E9 1792 aaKnown RBP18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 MBD4O95243 580 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 JAG1P78504 1218 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 CD99L2Q8TCZ2 262 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 PARK7Q99497 189 aaKnown RBP18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 ARMT1Q9H993 441 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 ZBTB21Q9ULJ3 1066 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 AGTPBP1Q9UPW5 1226 aa18.64■□□□□ 0.57
CCDC90B-215ENST00000529745 TRIM75PA6NK02 468 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 DLL1O00548 723 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 MX1P20591 662 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 PLCD1P51178 756 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 CAP1Q01518 475 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 SPP2Q13103 211 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 CCDC84Q86UT8 332 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 TRIM17Q9Y577 477 aa18.63■□□□□ 0.57
CCDC90B-215ENST00000529745 GNRH1P01148 92 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 CHGBP05060 677 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 BCRP11274 1271 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 SHMT1P34896 483 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 TSHZ3Q63HK5 1081 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 GADL1Q6ZQY3 521 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 OTUD7AQ8TE49 926 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 APPBP2Q92624 585 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 RWDD1Q9H446 243 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 EFCC1Q9HA90 598 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-215ENST00000529745 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 C19orf81C9J6K1 198 aa18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 POLR3DP05423 398 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 BACE1P56817 501 aa18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 PTPN22Q9Y2R2 807 aa18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 TRIOBPQ9H2D6 2365 aa18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-215ENST00000529745 RNF113AO15541 343 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 GDF11O95390 407 aa18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 CERKLQ49MI3 558 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 GIMAP6Q6P9H5 292 aa18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 SWAP70Q9UH65 585 aa18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 PNMA3Q9UL41 463 aa18.6■□□□□ 0.57
CCDC90B-215ENST00000529745 USP17L10C9JJH3 530 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 PRKAB2O43741 272 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 GH2P01242 217 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 HMGCS2P54868 508 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 KIF22Q14807 665 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 OSBP2Q969R2 916 aa18.59■□□□□ 0.57
CCDC90B-215ENST00000529745 POTEFA5A3E0 1075 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 CYP2C8P10632 490 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 HOXA7P31268 230 aaPredicted RBP18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 PDE1AP54750 535 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 PRMT2P55345 433 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 TREML2Q5T2D2 321 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 C12orf42Q96LP6 360 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 CPA4Q9UI42 421 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 SLC4A4Q9Y6R1 1079 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 COL6A3P12111 3177 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 CEP290O15078 2479 aa18.58■□□□□ 0.56
CCDC90B-215ENST00000529745 EVX2Q03828 476 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 MTMR2Q13614 643 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 ARPP21Q9UBL0 812 aaPredicted RBP18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 COLQQ9Y215 455 aaPredicted RBP18.57■□□□□ 0.56
CCDC90B-215ENST00000529745 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 USP17L12C9JPN9 530 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 USP17L21D6R901 530 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 IGHDP01880 384 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 GNAT2P19087 354 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 GUCY1A2P33402 732 aa18.56■□□□□ 0.56
CCDC90B-215ENST00000529745 C16orf86Q6ZW13 317 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms