RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ST18O60284 1047 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-211ENST00000528787 CYP21A2P08686 494 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 CAP2P40123 477 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 ECE1P42892 770 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
SSBP3-211ENST00000528787 PLCD1P51178 756 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 PTH1RQ03431 593 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 PPATQ06203 517 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 BLOC1S2Q6QNY1 142 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 SYNE3Q6ZMZ3 975 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 KCNB2Q92953 911 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 KLRG1Q96E93 195 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 NEK1Q96PY6 1258 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 CYP46A1Q9Y6A2 500 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 PLIN4Q96Q06 1357 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 C19orf81C9J6K1 198 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 E7EWF7 191 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 TTLL1O95922 423 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 CHGBP05060 677 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 CALM1P0DP23 149 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 CALM2P0DP24 149 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 CALM3P0DP25 149 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 ZBTB48P10074 688 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-211ENST00000528787 MCM2P49736 904 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 APLP1P51693 650 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 INHBEP58166 350 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 HAND2P61296 217 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
SSBP3-211ENST00000528787 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 RRP12Q5JTH9 1297 aaKnown RBP9.33□□□□□ -0.92
SSBP3-211ENST00000528787 OTUD7BQ6GQQ9 843 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
SSBP3-211ENST00000528787 DGKHQ86XP1 1220 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
SSBP3-211ENST00000528787 NEDD1Q8NHV4 660 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 SLC10A4Q96EP9 437 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
SSBP3-211ENST00000528787 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-211ENST00000528787 USP2O75604 605 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-211ENST00000528787 RCAN1P53805 252 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 HUNKP57058 714 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 TFAP4Q01664 338 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 RABEP1Q15276 862 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 RCSD1Q6JBY9 416 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 MIGA2Q7L4E1 593 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 IL17RAQ96F46 866 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 FEZ1Q99689 392 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 NYAP2Q9P242 653 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 PNMA2Q9UL42 364 aa9.32□□□□□ -0.92
SSBP3-211ENST00000528787 ABT1Q9ULW3 272 aaKnown RBP9.32□□□□□ -0.92
SSBP3-211ENST00000528787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSBP3-211ENST00000528787 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 CXCL11O14625 94 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 FOXP2O15409 715 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 KDM4AO75164 1064 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
SSBP3-211ENST00000528787 RASA1P20936 1047 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 SHMT1P34896 483 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 LIFRP42702 1097 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 GTF2A2P52657 109 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 ICA1Q05084 483 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 TRAF1Q13077 416 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 PPIL2Q13356 520 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 RAB3GAP1Q15042 981 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 IFIT1BQ5T764 474 aaKnown RBP9.31□□□□□ -0.92
SSBP3-211ENST00000528787 RUFY3Q7L099 469 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
SSBP3-211ENST00000528787 ZFPM1Q8IX07 1006 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 FBXL16Q8N461 479 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 LPAR1Q92633 364 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 JAKMIP1Q96N16 626 aaKnown RBP9.31□□□□□ -0.92
SSBP3-211ENST00000528787 WDR18Q9BV38 432 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 KAT14Q9H8E8 782 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 STX8Q9UNK0 236 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 MYH4Q9Y623 1939 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
SSBP3-211ENST00000528787 MANSC4A6NHS7 340 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 CCDC69A6NI79 296 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 SPDYE5A6NIY4 337 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 B4E1Z4 1266 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 TRAF5O00463 557 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 IFIT3O14879 490 aaKnown RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 GH2P01242 217 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms