RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 IFIT1BQ5T764 474 aaKnown RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
SOX6-211ENST00000528429 CMTR1Q8N1G2 835 aaKnown RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 ENAHQ8N8S7 591 aaPredicted RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
SOX6-211ENST00000528429 ZSCAN10Q96SZ4 725 aaPredicted RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 MKNK2Q9HBH9 465 aa8.97□□□□□ -0.97
SOX6-211ENST00000528429 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
SOX6-211ENST00000528429 PLCD1P51178 756 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 RBM5P52756 815 aaKnown RBP eCLIP8.96□□□□□ -0.97
SOX6-211ENST00000528429 CEBPZQ03701 1054 aaKnown RBP8.96□□□□□ -0.97
SOX6-211ENST00000528429 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 C12orf60Q5U649 245 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 ZNF654Q8IZM8 581 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 C7orf43Q8WVR3 580 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 C8orf76Q96K31 380 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 AIFM3Q96NN9 605 aa8.96□□□□□ -0.97
SOX6-211ENST00000528429 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.97
SOX6-211ENST00000528429 LTBP1Q14766 1721 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 CCDC88AQ3V6T2 1871 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 CDKL5O76039 1030 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 RHBDL3P58872 404 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 KRT85P78386 507 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 RTN1Q16799 776 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 NBPF20Q3BBV1 942 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 SLC26A6Q9BXS9 759 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
SOX6-211ENST00000528429 C10orf71Q711Q0 1435 aa8.96□□□□□ -0.98
SOX6-211ENST00000528429 MAST2Q6P0Q8 1798 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 GAKO14976 1311 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 FLT1P17948 1338 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 TIAM2Q8IVF5 1701 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 UBE2Q2LH0YL09 131 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 PCP11498 1178 aaKnown RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 IARSP41252 1262 aaKnown RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 SMAP1Q8IYB5 467 aaPredicted RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 TEKT1Q969V4 418 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 FAM163AQ96GL9 167 aaPredicted RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 CHD4Q14839 1912 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 MYH2Q9UKX2 1941 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 ORC4O43929 436 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 POLD1P28340 1107 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 TFAP4Q01664 338 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 RESTQ13127 1097 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 SEC23AQ15436 765 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 ARMCX6Q7L4S7 300 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 CATIPQ7Z7H3 387 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 EXOC8Q8IYI6 725 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 ALG1Q9BT22 464 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 ZNF277Q9NRM2 450 aaPredicted RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
SOX6-211ENST00000528429 USP40Q9NVE5 1235 aa8.95□□□□□ -0.98
SOX6-211ENST00000528429 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
SOX6-211ENST00000528429 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 MBD3O95983 291 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 CACNB3P54284 484 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 KIAA2012Q0VF49 1180 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 ZNF444Q8N0Y2 327 aaPredicted RBP8.94□□□□□ -0.98
SOX6-211ENST00000528429 FANCBQ8NB91 859 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 SUGT1Q9Y2Z0 365 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 PCDHAC2Q9Y5I4 1007 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 TTC36A6NLP5 189 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 FGRP09769 529 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 TSPY3P0CV98 308 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 TSPY8P0CW00 308 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 KCNA3P22001 575 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 CRKP46108 304 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 DACT2Q5SW24 774 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 STRIP1Q5VSL9 837 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 DNAJC14Q6Y2X3 702 aaPredicted RBP8.94□□□□□ -0.98
SOX6-211ENST00000528429 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 SUPT20HQ8NEM7 779 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 STX8Q9UNK0 236 aa8.94□□□□□ -0.98
SOX6-211ENST00000528429 RAD17O75943 681 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 SSRP1Q08945 709 aaKnown RBP8.93□□□□□ -0.98
SOX6-211ENST00000528429 NTRK3Q16288 839 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 TTC6Q86TZ1 520 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 FBXO18Q8NFZ0 1043 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 SPATA32Q96LK8 384 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 FTOQ9C0B1 505 aaKnown RBP eCLIP8.93□□□□□ -0.98
SOX6-211ENST00000528429 ZSCAN16Q9H4T2 348 aaPredicted RBP8.93□□□□□ -0.98
SOX6-211ENST00000528429 DDX4Q9NQI0 724 aaKnown RBP8.93□□□□□ -0.98
SOX6-211ENST00000528429 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
SOX6-211ENST00000528429 UTRNP46939 3433 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 CCDC196A0A1B0GTZ2 297 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 hCG_1642624A0A1W2PR95 340 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 TCP10Q12799 353 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 GNL2Q13823 731 aaKnown RBP8.93□□□□□ -0.98
SOX6-211ENST00000528429 CDC42EP5Q6NZY7 148 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 RTKN2Q8IZC4 609 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 PIBF1Q8WXW3 757 aa8.93□□□□□ -0.98
SOX6-211ENST00000528429 MTA3Q9BTC8 594 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms