RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 ZNF592Q92610 1267 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 DUOX1Q9NRD9 1551 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 PDS5AQ29RF7 1337 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 ATP1A3P13637 1013 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 ERFEQ4G0M1 354 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 CATIPQ7Z7H3 387 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 CCDC82Q8N4S0 544 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 MLKLQ8NB16 471 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 TRMT1Q9NXH9 659 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 COL4A1P02462 1669 aa12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-204ENST00000527079 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 BMP15O95972 392 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 SARSP49591 514 aaKnown RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 NR5A1Q13285 461 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 E4F1Q66K89 784 aaPredicted RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 MINPP1Q9UNW1 487 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 PCDHB6Q9Y5E3 794 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 CFAP100Q494V2 611 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 CT47A1Q5JQC4 288 aaPredicted RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
PTPMT1-204ENST00000527079 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 DDAH1O94760 285 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 BMP6P22004 513 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 KRT2P35908 639 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 FUT2Q10981 343 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 CMTR1Q8N1G2 835 aaKnown RBP12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 PPP1R13BQ96KQ4 1090 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 FANCLQ9NW38 375 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 ZBTB22O15209 634 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 MORC3Q14149 939 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 PKN1Q16512 942 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 SPATA20Q8TB22 786 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 ENOX1Q8TC92 643 aaKnown RBP12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 TAF1P21675 1872 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
PTPMT1-204ENST00000527079 FOXN1O15353 648 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 ORC4O43929 436 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 GRIN1Q05586 938 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 TROAPQ12815 778 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 FEZ1Q99689 392 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 NT5C2P49902 561 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 PDE4BQ07343 736 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 DPF2Q92785 391 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 NSUN4Q96CB9 384 aaKnown RBP12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
PTPMT1-204ENST00000527079 LAMB1P07942 1786 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 IGSF3O75054 1194 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 ZNF18P17022 549 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 LINC00116Q8NCU8 138 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 KCNQ2O43526 872 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms