RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ECHDC1Q9NTX5 307 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
PKP3-204ENST00000526971 RBM27Q9P2N5 1060 aaKnown RBP23.14■■□□□ 1.29
PKP3-204ENST00000526971 AGTPBP1Q9UPW5 1226 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 PLXNB2O15031 1838 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 FOCADQ5VW36 1801 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
PKP3-204ENST00000526971 FARP2O94887 1054 aaPredicted RBP23.13■■□□□ 1.29
PKP3-204ENST00000526971 INHAP05111 366 aa23.13■■□□□ 1.29
PKP3-204ENST00000526971 RRP1BQ14684 758 aaKnown RBP23.13■■□□□ 1.29
PKP3-204ENST00000526971 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
PKP3-204ENST00000526971 SMCR8Q8TEV9 937 aaPredicted RBP23.13■■□□□ 1.29
PKP3-204ENST00000526971 PAG1Q9NWQ8 432 aa23.13■■□□□ 1.29
PKP3-204ENST00000526971 TNPO2O14787 897 aaKnown RBP23.12■■□□□ 1.29
PKP3-204ENST00000526971 TBC1D12O60347 775 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 PLCG2P16885 1265 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 TEX11Q8IYF3 940 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 ANKRD13CQ8N6S4 541 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 EDC3Q96F86 508 aaKnown RBP23.12■■□□□ 1.29
PKP3-204ENST00000526971 GPATCH3Q96I76 525 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 PRO3102Q9H379 93 aa23.12■■□□□ 1.29
PKP3-204ENST00000526971 RWDD1Q9H446 243 aaPredicted RBP23.12■■□□□ 1.29
PKP3-204ENST00000526971 SGPL1O95470 568 aa23.11■■□□□ 1.29
PKP3-204ENST00000526971 IRF5Q13568 498 aa23.11■■□□□ 1.29
PKP3-204ENST00000526971 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
PKP3-204ENST00000526971 HTATIP2Q9BUP3 242 aa23.1■■□□□ 1.29
PKP3-204ENST00000526971 OSBPL5Q9H0X9 879 aaPredicted RBP23.1■■□□□ 1.29
PKP3-204ENST00000526971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.29
PKP3-204ENST00000526971 PDE6AP16499 860 aa23.09■■□□□ 1.29
PKP3-204ENST00000526971 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
PKP3-204ENST00000526971 SPP2Q13103 211 aa23.09■■□□□ 1.29
PKP3-204ENST00000526971 SLC9C2Q5TAH2 1124 aa23.09■■□□□ 1.29
PKP3-204ENST00000526971 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
PKP3-204ENST00000526971 PXYLP1Q8TE99 480 aa23.09■■□□□ 1.29
PKP3-204ENST00000526971 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
PKP3-204ENST00000526971 LAMA3Q16787 3333 aa23.08■■□□□ 1.29
PKP3-204ENST00000526971 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
PKP3-204ENST00000526971 FAM110CQ1W6H9 321 aa23.08■■□□□ 1.29
PKP3-204ENST00000526971 MIGA1Q8NAN2 632 aa23.08■■□□□ 1.29
PKP3-204ENST00000526971 DEFB118Q96PH6 123 aa23.08■■□□□ 1.29
PKP3-204ENST00000526971 PAK6Q9NQU5 681 aaPredicted RBP23.08■■□□□ 1.29
PKP3-204ENST00000526971 IGHDP01880 384 aa23.07■■□□□ 1.28
PKP3-204ENST00000526971 TSHZ3Q63HK5 1081 aa23.07■■□□□ 1.28
PKP3-204ENST00000526971 PROCA1Q8NCQ7 364 aaPredicted RBP23.07■■□□□ 1.28
PKP3-204ENST00000526971 OTUD7AQ8TE49 926 aaPredicted RBP23.07■■□□□ 1.28
PKP3-204ENST00000526971 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
PKP3-204ENST00000526971 TTC41PQ6P2S7 1318 aa23.07■■□□□ 1.28
PKP3-204ENST00000526971 TCRBV5S4A2TA0A5A2 114 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 HMGCS2P54868 508 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 ZNF280CQ8ND82 737 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 TGFBRAP1Q8WUH2 860 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 ZNF532Q9HCE3 1301 aa23.06■■□□□ 1.28
PKP3-204ENST00000526971 CAP2P40123 477 aa23.05■■□□□ 1.28
PKP3-204ENST00000526971 MAPKAPK5Q8IW41 473 aa23.05■■□□□ 1.28
PKP3-204ENST00000526971 RIOK1Q9BRS2 568 aaKnown RBP23.05■■□□□ 1.28
PKP3-204ENST00000526971 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.05■■□□□ 1.282e-6■■■■□ 20.9
PKP3-204ENST00000526971 CRISPLD2Q9H0B8 497 aa23.05■■□□□ 1.28
PKP3-204ENST00000526971 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
PKP3-204ENST00000526971 DDX60LQ5H9U9 1706 aaKnown RBP23.05■■□□□ 1.28
PKP3-204ENST00000526971 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
PKP3-204ENST00000526971 JAG1P78504 1218 aa23.04■■□□□ 1.28
PKP3-204ENST00000526971 SHROOM1Q2M3G4 852 aaPredicted RBP23.04■■□□□ 1.28
PKP3-204ENST00000526971 DIS3LQ8TF46 1054 aaKnown RBP23.04■■□□□ 1.28
PKP3-204ENST00000526971 COA7Q96BR5 231 aa23.04■■□□□ 1.28
PKP3-204ENST00000526971 FLT1P17948 1338 aa23.04■■□□□ 1.28
PKP3-204ENST00000526971 ERC2O15083 957 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 MX1P20591 662 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 ADD2P35612 726 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 PI4K2BQ8TCG2 481 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 ASCC2Q9H1I8 757 aaPredicted RBP23.03■■□□□ 1.28
PKP3-204ENST00000526971 DHX36Q9H2U1 1008 aaKnown RBP23.03■■□□□ 1.28
PKP3-204ENST00000526971 DNAJC18Q9H819 358 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 SALL3Q9BXA9 1300 aa23.03■■□□□ 1.28
PKP3-204ENST00000526971 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 GLRX3O76003 335 aaKnown RBP23.02■■□□□ 1.28
PKP3-204ENST00000526971 TFRCP02786 760 aaKnown RBP23.02■■□□□ 1.28
PKP3-204ENST00000526971 TRIM32Q13049 653 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 UBE3CQ15386 1083 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 SH3D19Q5HYK7 790 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 ZSCAN25Q6NSZ9 544 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.02■■□□□ 1.285e-6■■■■■ 34.2
PKP3-204ENST00000526971 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 MYH1P12882 1939 aa23.02■■□□□ 1.28
PKP3-204ENST00000526971 PEX10O60683 326 aa23.01■■□□□ 1.27
PKP3-204ENST00000526971 USP5P45974 858 aa23.01■■□□□ 1.27
PKP3-204ENST00000526971 GCLCP48506 637 aaPredicted RBP23.01■■□□□ 1.27
PKP3-204ENST00000526971 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
PKP3-204ENST00000526971 PAWRQ96IZ0 340 aaKnown RBP23.01■■□□□ 1.27
PKP3-204ENST00000526971 TBC1D2Q9BYX2 928 aa23.01■■□□□ 1.27
PKP3-204ENST00000526971 PI4KBQ9UBF8 816 aa23.01■■□□□ 1.27
PKP3-204ENST00000526971 HERC5Q9UII4 1024 aaKnown RBP23.01■■□□□ 1.27
PKP3-204ENST00000526971 SLFNL1Q499Z3 407 aa23■■□□□ 1.27
PKP3-204ENST00000526971 B4GALNT3Q6L9W6 998 aa23■■□□□ 1.27
PKP3-204ENST00000526971 STAP2Q9UGK3 403 aa23■■□□□ 1.27
PKP3-204ENST00000526971 EVI5O60447 810 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 HMGCRP04035 888 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 MTMR2Q13614 643 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 CRNKL1Q9BZJ0 848 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 1493.2 ms