RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
CAPN1-205ENST00000526954 LDLRAD1Q5T700 205 aa19.57■□□□□ 0.72
CAPN1-205ENST00000526954 GINM1Q9NU53 330 aa19.57■□□□□ 0.72
CAPN1-205ENST00000526954 GREB1LQ9C091 1923 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-205ENST00000526954 NEDD4P46934 1319 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 PRDM1O75626 825 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 KRT32Q14532 448 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-205ENST00000526954 STOX1Q6ZVD7 989 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 MOB2Q70IA6 237 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 ZNF444Q8N0Y2 327 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-205ENST00000526954 KRT23Q9C075 422 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 SNX14Q9Y5W7 946 aa19.56■□□□□ 0.72
CAPN1-205ENST00000526954 INPP5BP32019 993 aa19.55■□□□□ 0.72
CAPN1-205ENST00000526954 ANAPC15P60006 121 aa19.55■□□□□ 0.72
CAPN1-205ENST00000526954 ANKRD13AQ8IZ07 590 aa19.55■□□□□ 0.72
CAPN1-205ENST00000526954 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
CAPN1-205ENST00000526954 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
CAPN1-205ENST00000526954 PLIN4Q96Q06 1357 aa19.55■□□□□ 0.72
CAPN1-205ENST00000526954 TMEM88BA6NKF7 163 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 UBE2Q2LH0YL09 131 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 TRDNQ13061 729 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 ABCB5Q2M3G0 1257 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 NCOA7Q8NI08 942 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 ESR2Q92731 530 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 TOMM22Q9NS69 142 aa19.54■□□□□ 0.72
CAPN1-205ENST00000526954 B4E1Z4 1266 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 RANBP6O60518 1105 aaKnown RBP19.53■□□□□ 0.72
CAPN1-205ENST00000526954 GDF11O95390 407 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 ASNSP08243 561 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 AKR1B1P15121 316 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
CAPN1-205ENST00000526954 JAG1P78504 1218 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 VGLL4Q14135 290 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
CAPN1-205ENST00000526954 TMEM179Q6ZVK1 233 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 NEDD1Q8NHV4 660 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 ZKSCAN4Q969J2 545 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-205ENST00000526954 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 CSADQ9Y600 493 aa19.53■□□□□ 0.72
CAPN1-205ENST00000526954 GH2P01242 217 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 APLP1P51693 650 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 TFAP4Q01664 338 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 ADCK5Q3MIX3 580 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 FAM47AQ5JRC9 791 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 SAPCD2Q86UD0 394 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 NKX2-3Q8TAU0 364 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.52■□□□□ 0.72
CAPN1-205ENST00000526954 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 SNCAIPQ9Y6H5 919 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 TLL2Q9Y6L7 1015 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 PHIPQ8WWQ0 1821 aa19.52■□□□□ 0.72
CAPN1-205ENST00000526954 IGKV6D-41A0A0C4DH26 115 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 TSPY2A6NKD2 308 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 KDM4AO75164 1064 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 TSPY3P0CV98 308 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 TSPY8P0CW00 308 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 RALYLQ86SE5 291 aaKnown RBP19.51■□□□□ 0.71
CAPN1-205ENST00000526954 MB21D2Q8IYB1 491 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-205ENST00000526954 HHIPL1Q96JK4 782 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 TCP11L1Q9NUJ3 509 aa19.51■□□□□ 0.71
CAPN1-205ENST00000526954 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
CAPN1-205ENST00000526954 HMGB1P09429 215 aaKnown RBP19.5■□□□□ 0.71
CAPN1-205ENST00000526954 PTPRAP18433 802 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 PSMA5P28066 241 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 HUNKP57058 714 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 SHROOM1Q2M3G4 852 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-205ENST00000526954 CLMNQ96JQ2 1002 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 TBC1D32Q96NH3 1257 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 TM6SF1Q9BZW5 370 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 KANSL2Q9H9L4 492 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 CREBZFQ9NS37 354 aa19.5■□□□□ 0.71
CAPN1-205ENST00000526954 SEPT2Q15019 361 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 CYB5R4Q7L1T6 521 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 ERO1BQ86YB8 467 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 SLC10A4Q96EP9 437 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 JAKMIP1Q96N16 626 aaKnown RBP19.49■□□□□ 0.71
CAPN1-205ENST00000526954 MTA3Q9BTC8 594 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 IL17RBQ9NRM6 502 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
CAPN1-205ENST00000526954 USP17L5A8MUK1 530 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 MCM5P33992 734 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 NOVP48745 357 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 CCDC178Q5BJE1 867 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 PPP4R3BQ5MIZ7 849 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
CAPN1-205ENST00000526954 IQCA1Q86XH1 822 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 ZSWIM6Q9HCJ5 1215 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 MTMR4Q9NYA4 1195 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 MYH4Q9Y623 1939 aa19.48■□□□□ 0.71
CAPN1-205ENST00000526954 SPDYE5A6NIY4 337 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 ANTXR2P58335 489 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms