RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
UBXN1-205ENST00000525004 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
UBXN1-205ENST00000525004 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
UBXN1-205ENST00000525004 SNX14Q9Y5W7 946 aa16.62■□□□□ 0.25
UBXN1-205ENST00000525004 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
UBXN1-205ENST00000525004 INPP5BP32019 993 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 JAG1P78504 1218 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 KRT32Q14532 448 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 MOB2Q70IA6 237 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 ZNF444Q8N0Y2 327 aaPredicted RBP16.61■□□□□ 0.25
UBXN1-205ENST00000525004 NEDD1Q8NHV4 660 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 WRNIP1Q96S55 665 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.61■□□□□ 0.25
UBXN1-205ENST00000525004 KRT23Q9C075 422 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 NEDD4P46934 1319 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
UBXN1-205ENST00000525004 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 PRDM1O75626 825 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 ASNSP08243 561 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 MCCP23508 829 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 GUCY1A2P33402 732 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 NOVP48745 357 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 SAPCD2Q86UD0 394 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 HHIPL1Q96JK4 782 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
UBXN1-205ENST00000525004 TMEM88BA6NKF7 163 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 AKR1B1P15121 316 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 PRKG1Q13976 671 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ABCB5Q2M3G0 1257 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ADCK5Q3MIX3 580 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 MB21D2Q8IYB1 491 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-205ENST00000525004 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ESR2Q92731 530 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-205ENST00000525004 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 SNCAIPQ9Y6H5 919 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
UBXN1-205ENST00000525004 MYH4Q9Y623 1939 aa16.58■□□□□ 0.25
UBXN1-205ENST00000525004 B4E1Z4 1266 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 APLP1P51693 650 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 TFAP4Q01664 338 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 TRDNQ13061 729 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 VGLL4Q14135 290 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 C22orf23Q9BZE7 217 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 ZBTB21Q9ULJ3 1066 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 PTPRFP10586 1907 aa16.58■□□□□ 0.24
UBXN1-205ENST00000525004 WDR19Q8NEZ3 1342 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 KDM4AO75164 1064 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 GDF11O95390 407 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 GH2P01242 217 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 PTPRAP18433 802 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 EXOSC10Q01780 885 aaKnown RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 COL9A3Q14050 684 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 TTLL12Q14166 644 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 SIAH1Q8IUQ4 282 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 TBC1D32Q96NH3 1257 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 KIF2CQ99661 725 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 UPF2Q9HAU5 1272 aaKnown RBP16.57■□□□□ 0.24
UBXN1-205ENST00000525004 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
UBXN1-205ENST00000525004 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 PSMA5P28066 241 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
UBXN1-205ENST00000525004 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 MKL1Q969V6 931 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 KANSL2Q9H9L4 492 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 CSADQ9Y600 493 aa16.56■□□□□ 0.24
UBXN1-205ENST00000525004 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 USP17L5A8MUK1 530 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 MCM5P33992 734 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 HUNKP57058 714 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 ANTXR2P58335 489 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 PPATQ06203 517 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 SEPT2Q15019 361 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 CCDC178Q5BJE1 867 aa16.55■□□□□ 0.24
UBXN1-205ENST00000525004 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
UBXN1-205ENST00000525004 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms