RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SERPINB2P05120 415 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
NEDD8-203ENST00000524927 C1orf53Q5VUE5 145 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 ZSCAN29Q8IWY8 852 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-203ENST00000524927 ZNF428Q96B54 188 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 CSRNP1Q96S65 589 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 BRPF3Q9ULD4 1205 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
NEDD8-203ENST00000524927 COL5A3P25940 1745 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-203ENST00000524927 LAMA3Q16787 3333 aa9.84□□□□□ -0.83
NEDD8-203ENST00000524927 PAPPA2Q9BXP8 1791 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 NDUFB5O43674 189 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 EN2P19622 333 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-203ENST00000524927 NFIXQ14938 502 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 GALNT6Q8NCL4 622 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 RHPN1Q8TCX5 695 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
NEDD8-203ENST00000524927 PDE6BP35913 854 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 EPS15P42566 896 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 NBPF6Q5VWK0 638 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 NBPF4Q96M43 638 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 SUV39H2Q9H5I1 410 aa9.82□□□□□ -0.84
NEDD8-203ENST00000524927 MYH14Q7Z406 1995 aaKnown RBP9.82□□□□□ -0.84
NEDD8-203ENST00000524927 RGPD2P0DJD1 1756 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 PIEZO1Q92508 2521 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 CARMIL3Q8ND23 1372 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 SOX1O00570 391 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-203ENST00000524927 NME9Q86XW9 330 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 MPHOSPH9Q99550 1183 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 GLIS2Q9BZE0 524 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-203ENST00000524927 RUBCNLQ9H714 662 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 ZNF408Q9H9D4 720 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 RAPGEFL1Q9UHV5 662 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 HTTP42858 3142 aa9.81□□□□□ -0.84
NEDD8-203ENST00000524927 CENPJQ9HC77 1338 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-203ENST00000524927 ZBTB39O15060 712 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 HOXC9P31274 260 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 PRPF40BQ6NWY9 871 aaKnown RBP9.8□□□□□ -0.84
NEDD8-203ENST00000524927 LINC00114Q6XXX2 140 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.8□□□□□ -0.84
NEDD8-203ENST00000524927 ASB16Q96NS5 453 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 BRIP1Q9BX63 1249 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-203ENST00000524927 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 PGAP2Q9UHJ9 254 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 SYNGAP1Q96PV0 1343 aa9.8□□□□□ -0.84
NEDD8-203ENST00000524927 MAP2K3P46734 347 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-203ENST00000524927 HIF1AQ16665 826 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 STYK1Q6J9G0 422 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 CDC37L1Q7L3B6 337 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 ATCAYQ86WG3 371 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 ETFBKMTQ8IXQ9 262 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 DEFB123Q8N688 67 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 NEUROD4Q9HD90 331 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 HCN2Q9UL51 889 aa9.79□□□□□ -0.84
NEDD8-203ENST00000524927 FURINP09958 794 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 CRKLP46109 303 aaKnown RBP9.78□□□□□ -0.84
NEDD8-203ENST00000524927 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
NEDD8-203ENST00000524927 CTBSQ01459 385 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 FAM26DQ5JW98 314 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 USHBP1Q8N6Y0 703 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 C7orf43Q8WVR3 580 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 JDP2Q8WYK2 163 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 ADARB2Q9NS39 739 aaKnown RBP9.78□□□□□ -0.84
NEDD8-203ENST00000524927 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
NEDD8-203ENST00000524927 GJA3Q9Y6H8 435 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
NEDD8-203ENST00000524927 SLX4Q8IY92 1834 aa9.77□□□□□ -0.84
NEDD8-203ENST00000524927 MON2Q7Z3U7 1717 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 FZD6O60353 706 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 MSX1P28360 303 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 IARSP41252 1262 aaKnown RBP9.77□□□□□ -0.85
NEDD8-203ENST00000524927 ZAP70P43403 619 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 AMPHP49418 695 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
NEDD8-203ENST00000524927 ARSJQ5FYB0 599 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-203ENST00000524927 TREML1Q86YW5 311 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 RGL4Q8IZJ4 473 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 RBCK1Q9BYM8 510 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 EVC2Q86UK5 1308 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 CENPFP49454 3210 aa9.77□□□□□ -0.85
NEDD8-203ENST00000524927 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 K7ELQ4 463 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-203ENST00000524927 BNIP3LO60238 219 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 TBC1D8O95759 1140 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
NEDD8-203ENST00000524927 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms