RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 SLC9C2Q5TAH2 1124 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 FBXO33Q7Z6M2 555 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 ZNF274Q96GC6 653 aaPredicted RBP8.9□□□□□ -0.98
CTR9-202ENST00000524523 SEC31BQ9NQW1 1179 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 DENND2AQ9ULE3 1009 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 SMC3Q9UQE7 1217 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 LY75O60449 1722 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 LAMB2P55268 1798 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 PNPLA7Q6ZV29 1317 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
CTR9-202ENST00000524523 PCP11498 1178 aaKnown RBP8.89□□□□□ -0.99
CTR9-202ENST00000524523 TM4SF1P30408 202 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 PHKA1P46020 1223 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 KLHL40Q2TBA0 621 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 CERS3Q8IU89 383 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 ZGPATQ8N5A5 531 aaKnown RBP8.89□□□□□ -0.99
CTR9-202ENST00000524523 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
CTR9-202ENST00000524523 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
CTR9-202ENST00000524523 ATP13A2Q9NQ11 1180 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 BTAF1O14981 1849 aa8.89□□□□□ -0.99
CTR9-202ENST00000524523 SCN7AQ01118 1682 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 TCRBV5S4A2TA0A5A2 114 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 GPAA1O43292 621 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 DHX16O60231 1041 aaKnown RBP8.88□□□□□ -0.99
CTR9-202ENST00000524523 BBOX1O75936 387 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 FGAP02671 866 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 TIMP2P16035 220 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 PDE6AP16499 860 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 HMGN5P82970 282 aaKnown RBP8.88□□□□□ -0.99
CTR9-202ENST00000524523 RASGRF1Q13972 1273 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 SCARF1Q14162 830 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 CRY2Q49AN0 593 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 PTF1AQ7RTS3 328 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 CCDC116Q8IYX3 515 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 NLGN1Q8N2Q7 840 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 SEC62Q99442 399 aaKnown RBP8.88□□□□□ -0.99
CTR9-202ENST00000524523 LRRC4BQ9NT99 713 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 ZDHHC9Q9Y397 364 aa8.88□□□□□ -0.99
CTR9-202ENST00000524523 E7EWF7 191 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 ZNF213O14771 459 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 STX6O43752 255 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 PFKFB2O60825 505 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 NR3C2P08235 984 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 GYS1P13807 737 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 MCM5P33992 734 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 TRDNQ13061 729 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 GRAPQ13588 217 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 TOB2Q14106 344 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 NFIXQ14938 502 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 ME3Q16798 604 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 SPTY2D1Q68D10 685 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 ATL3Q6DD88 541 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 TMTC2Q8N394 836 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 CNBD1Q8NA66 436 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 GRAPLQ8TC17 118 aaPredicted RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 CRAMP1Q96RY5 1269 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 STRBPQ96SI9 672 aaKnown RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 NACAP1Q9BZK3 213 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 PUS7LQ9H0K6 701 aaKnown RBP8.87□□□□□ -0.99
CTR9-202ENST00000524523 CNNM2Q9H8M5 875 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
CTR9-202ENST00000524523 ZNF532Q9HCE3 1301 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 SALL1Q9NSC2 1324 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 C4BP0C0L5 1744 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 POTECB2RU33 542 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 M0R2C6 588 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 IDH1O75874 414 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 MBD3O95983 291 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 FBXO45P0C2W1 286 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 SYT1P21579 422 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 RCAN1P53805 252 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 ST5P78524 1137 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 DHX9Q08211 1270 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 PPP2R5BQ15173 497 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 TXNRD1Q16881 649 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 L1TD1Q5T7N2 865 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 VPS37DQ86XT2 251 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 ZNF592Q92610 1267 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 AIDAQ96BJ3 306 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 TMEM87BQ96K49 555 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 FAM84BQ96KN1 310 aaPredicted RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 PIH1D3Q9NQM4 214 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
CTR9-202ENST00000524523 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
CTR9-202ENST00000524523 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms