RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 PTPRAP18433 802 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 MAGEA10P43363 369 aaPredicted RBP18.4■□□□□ 0.54
PCM1-218ENST00000523055 SH3BP5LQ7L8J4 393 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 PCDHB15Q9Y5E8 787 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 ZHX2Q9Y6X8 837 aa18.4■□□□□ 0.54
PCM1-218ENST00000523055 PRUNE2Q8WUY3 3088 aa18.39■□□□□ 0.54
PCM1-218ENST00000523055 RAB11FIP3O75154 756 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 SYN1P17600 705 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 GSTO1P78417 241 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 FASTKD5Q7L8L6 764 aaKnown RBP18.39■□□□□ 0.53
PCM1-218ENST00000523055 SCYL3Q8IZE3 742 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 TDHQ8IZJ6 230 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 ANKLE1Q8NAG6 615 aa18.39■□□□□ 0.53
PCM1-218ENST00000523055 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
PCM1-218ENST00000523055 DDTLA6NHG4 134 aaPredicted RBP18.38■□□□□ 0.53
PCM1-218ENST00000523055 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
PCM1-218ENST00000523055 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCM1-218ENST00000523055 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
PCM1-218ENST00000523055 LDHCP07864 332 aa18.37■□□□□ 0.53
PCM1-218ENST00000523055 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
PCM1-218ENST00000523055 MAP3K10Q02779 954 aa18.37■□□□□ 0.53
PCM1-218ENST00000523055 TRIM32Q13049 653 aa18.37■□□□□ 0.53
PCM1-218ENST00000523055 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
PCM1-218ENST00000523055 SH3RF3Q8TEJ3 882 aaPredicted RBP18.37■□□□□ 0.53
PCM1-218ENST00000523055 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
PCM1-218ENST00000523055 NAV1Q8NEY1 1877 aa18.36■□□□□ 0.53
PCM1-218ENST00000523055 ENTPD3O75355 529 aa18.36■□□□□ 0.53
PCM1-218ENST00000523055 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
PCM1-218ENST00000523055 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
PCM1-218ENST00000523055 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
PCM1-218ENST00000523055 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.36■□□□□ 0.53
PCM1-218ENST00000523055 GJD2Q9UKL4 321 aa18.36■□□□□ 0.53
PCM1-218ENST00000523055 MUC3AQ02505 3323 aa18.35■□□□□ 0.53
PCM1-218ENST00000523055 DDX60LQ5H9U9 1706 aaKnown RBP18.35■□□□□ 0.53
PCM1-218ENST00000523055 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCM1-218ENST00000523055 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
PCM1-218ENST00000523055 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
PCM1-218ENST00000523055 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
PCM1-218ENST00000523055 PFASO15067 1338 aa18.35■□□□□ 0.53
PCM1-218ENST00000523055 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 FAM110CQ1W6H9 321 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 TREML2Q5T2D2 321 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 CCDC84Q86UT8 332 aaPredicted RBP18.34■□□□□ 0.53
PCM1-218ENST00000523055 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
PCM1-218ENST00000523055 COA7Q96BR5 231 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 GUCD1Q96NT3 240 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
PCM1-218ENST00000523055 AGTPBP1Q9UPW5 1226 aa18.34■□□□□ 0.53
PCM1-218ENST00000523055 FAM196BA6NMK8 535 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 HMGCRP04035 888 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 CYP7A1P22680 504 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.53
PCM1-218ENST00000523055 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 DCTPP1Q9H773 170 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 OGDHLQ9ULD0 1010 aa18.33■□□□□ 0.53
PCM1-218ENST00000523055 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
PCM1-218ENST00000523055 RPTORQ8N122 1335 aa18.33■□□□□ 0.52
PCM1-218ENST00000523055 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.52
PCM1-218ENST00000523055 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 POTEB2H3BUK9 544 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 GOLIM4O00461 696 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 MIGA1Q8NAN2 632 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 UBE2OQ9C0C9 1292 aaKnown RBP18.32■□□□□ 0.52
PCM1-218ENST00000523055 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
PCM1-218ENST00000523055 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 COL2A1P02458 1487 aaPredicted RBP18.32■□□□□ 0.52
PCM1-218ENST00000523055 PLXNB2O15031 1838 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 TGFBRAP1Q8WUH2 860 aa18.32■□□□□ 0.52
PCM1-218ENST00000523055 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
PCM1-218ENST00000523055 HMX1Q9NP08 348 aaPredicted RBP18.32■□□□□ 0.52
PCM1-218ENST00000523055 BAG3O95817 575 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 PPP4CP60510 307 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 MAPKAPK5Q8IW41 473 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
PCM1-218ENST00000523055 TRIB2Q92519 343 aa18.31■□□□□ 0.52
PCM1-218ENST00000523055 FLT1P17948 1338 aa18.3■□□□□ 0.52
PCM1-218ENST00000523055 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
PCM1-218ENST00000523055 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
PCM1-218ENST00000523055 COL6A1P12109 1028 aa18.3■□□□□ 0.52
PCM1-218ENST00000523055 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
PCM1-218ENST00000523055 SLFNL1Q499Z3 407 aa18.3■□□□□ 0.52
PCM1-218ENST00000523055 MYH8P13535 1937 aa18.29■□□□□ 0.52
PCM1-218ENST00000523055 MAP4K4O95819 1239 aaPredicted RBP18.29■□□□□ 0.52
PCM1-218ENST00000523055 CHGBP05060 677 aa18.29■□□□□ 0.52
PCM1-218ENST00000523055 ATP5JP18859 108 aa18.29■□□□□ 0.52
PCM1-218ENST00000523055 PDE6AP16499 860 aa18.28■□□□□ 0.52
PCM1-218ENST00000523055 PLCG2P16885 1265 aa18.28■□□□□ 0.52
PCM1-218ENST00000523055 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
PCM1-218ENST00000523055 HAUS7Q99871 368 aa18.28■□□□□ 0.52
PCM1-218ENST00000523055 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
PCM1-218ENST00000523055 SAP30BPQ9UHR5 308 aaKnown RBP18.28■□□□□ 0.52
PCM1-218ENST00000523055 LOC285556D6RIA3 1793 aa18.27■□□□□ 0.52
PCM1-218ENST00000523055 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms