RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 MINDY4BA8MYZ0 360 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 PRKAB2O43741 272 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 PPFIA3O75145 1194 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-214ENST00000521550 ZNF165P49910 485 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-214ENST00000521550 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 ANO10Q9NW15 660 aa16.26■□□□□ 0.19
SPIDR-214ENST00000521550 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-214ENST00000521550 XBP1P17861 261 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 GRAPQ13588 217 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 KRT40Q6A162 431 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 LARGE2Q8N3Y3 721 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
SPIDR-214ENST00000521550 CRNKL1Q9BZJ0 848 aaKnown RBP16.25■□□□□ 0.19
SPIDR-214ENST00000521550 PCDHA7Q9UN72 937 aa16.25■□□□□ 0.19
SPIDR-214ENST00000521550 CALM1P0DP23 149 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 CALM2P0DP24 149 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 CALM3P0DP25 149 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
SPIDR-214ENST00000521550 OTUD7BQ6GQQ9 843 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 SLC26A6Q9BXS9 759 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 OFD1O75665 1012 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 CDC27P30260 824 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
SPIDR-214ENST00000521550 TDRD7Q8NHU6 1098 aaKnown RBP16.24■□□□□ 0.19
SPIDR-214ENST00000521550 LEMD3Q9Y2U8 911 aa16.24■□□□□ 0.19
SPIDR-214ENST00000521550 COL4A5P29400 1685 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 PPP6R2O75170 966 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 DEXIO95424 95 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 SLC39A14Q15043 492 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 NTRK3Q16288 839 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-214ENST00000521550 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 GPC2Q8N158 579 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 SUPT20HQ8NEM7 779 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
SPIDR-214ENST00000521550 FTOQ9C0B1 505 aaKnown RBP eCLIP16.23■□□□□ 0.19
SPIDR-214ENST00000521550 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 PCNTO95613 3336 aa16.23■□□□□ 0.19
SPIDR-214ENST00000521550 BECN2A8MW95 431 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 RXRAP19793 462 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 CMA1P23946 247 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 HTRA3P83110 453 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 MPNDQ8N594 471 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 PHKBQ93100 1093 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 VPS33BQ9H267 617 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 TAF1DQ9H5J8 278 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 ATP8A2Q9NTI2 1148 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 U2AF2P26368 475 aaKnown RBP eCLIP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 GSTO1P78417 241 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 NIM1KQ8IY84 436 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 ZNF654Q8IZM8 581 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 FMR1NBQ8N0W7 255 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
SPIDR-214ENST00000521550 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
SPIDR-214ENST00000521550 LRRC37AA6NMS7 1700 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 POTEIP0CG38 1075 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 TERF1P54274 439 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 TPM4P67936 248 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 AOC3Q16853 763 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 CERS3Q8IU89 383 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
SPIDR-214ENST00000521550 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-214ENST00000521550 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
SPIDR-214ENST00000521550 TRIM5Q9C035 493 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-214ENST00000521550 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.19
SPIDR-214ENST00000521550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPIDR-214ENST00000521550 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
SPIDR-214ENST00000521550 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
SPIDR-214ENST00000521550 DRC7Q8IY82 874 aa16.2■□□□□ 0.18
SPIDR-214ENST00000521550 TIGD1Q96MW7 591 aa16.2■□□□□ 0.18
SPIDR-214ENST00000521550 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms