RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 C1GALT1Q9NS00 363 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 PRKAG2Q9UGJ0 569 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 LRIG2O94898 1065 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 ATE1O95260 518 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
SKP1-208ENST00000521216 SOX9P48436 509 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 YARSP54577 528 aaKnown RBP8.16□□□□□ -1.1
SKP1-208ENST00000521216 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 TMEM201Q5SNT2 666 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 SLC6A19Q695T7 634 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
SKP1-208ENST00000521216 FSTP19883 344 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 ADMP35318 185 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 NFIAQ12857 509 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 SEZ6L2Q6UXD5 910 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
SKP1-208ENST00000521216 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 TOP6BLQ8N6T0 577 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 SLC43A3Q8NBI5 491 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 SEMA6BQ9H3T3 888 aa8.15□□□□□ -1.1
SKP1-208ENST00000521216 SLC22A31A6NKX4 558 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 DYRK3O43781 588 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 DNAJA2O60884 412 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
SKP1-208ENST00000521216 FAM87AP0C7U9 286 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 IMPDH2P12268 514 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 LRRFIP1Q32MZ4 808 aaKnown RBP8.14□□□□□ -1.11
SKP1-208ENST00000521216 ARSHQ5FYA8 562 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 SHISA5Q8N114 240 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 MIPEPQ99797 713 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 SRRTQ9BXP5 876 aaKnown RBP8.14□□□□□ -1.11
SKP1-208ENST00000521216 TANGO6Q9C0B7 1094 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 GMIPQ9P107 970 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 MRVI1Q9Y6F6 885 aa8.14□□□□□ -1.11
SKP1-208ENST00000521216 FAM170BA6NMN3 283 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 LEFTY1O75610 366 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 RAG1P15918 1043 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
SKP1-208ENST00000521216 OVOS1Q6IE37 1185 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 ZAR1Q86SH2 424 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 DBNDD2Q9BQY9 259 aa8.13□□□□□ -1.11
SKP1-208ENST00000521216 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
SKP1-208ENST00000521216 GSC2O15499 205 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 SHKBP1Q8TBC3 707 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 PSMG3-AS1Q96PY0 264 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 KIF2CQ99661 725 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 DUSP23Q9BVJ7 150 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
SKP1-208ENST00000521216 FAM86C2PA6NEL3 165 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 SLITRK5O94991 958 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 F13BP05160 661 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 GBP1P32455 592 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 CAP2P40123 477 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 DUSP27Q5VZP5 1158 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 LETMD1Q6P1Q0 360 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 ZNF765Q7L2R6 523 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 CDH24Q86UP0 819 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 MCF2L2Q86YR7 1114 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 RIN3Q8TB24 985 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 ATG4CQ96DT6 458 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 OSBPL1AQ9BXW6 950 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
SKP1-208ENST00000521216 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
SKP1-208ENST00000521216 POLR2BP30876 1174 aaKnown RBP8.1□□□□□ -1.11
SKP1-208ENST00000521216 PPP2R5EQ16537 467 aa8.1□□□□□ -1.11
SKP1-208ENST00000521216 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
SKP1-208ENST00000521216 SLFN12Q8IYM2 578 aa8.1□□□□□ -1.11
SKP1-208ENST00000521216 BAHD1Q8TBE0 780 aaPredicted RBP8.1□□□□□ -1.11
SKP1-208ENST00000521216 GATA6Q92908 595 aa8.1□□□□□ -1.11
SKP1-208ENST00000521216 CCDC74BQ96LY2 380 aa8.1□□□□□ -1.11
SKP1-208ENST00000521216 FGRP09769 529 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 ATP2B1P20020 1258 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 CYP27C1Q4G0S4 372 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 SHDQ96IW2 340 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 GMLQ99445 158 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 CNNM2Q9H8M5 875 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
SKP1-208ENST00000521216 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
SKP1-208ENST00000521216 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
SKP1-208ENST00000521216 GIPRP48546 466 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms