RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SYNGAP1Q96PV0 1343 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 TMEM94Q12767 1356 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 SLIT1O75093 1534 aa8.96□□□□□ -0.97
PABPC1-216ENST00000520868 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
PABPC1-216ENST00000520868 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 GSTT1P30711 240 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 CD97P48960 835 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 PAOXQ6QHF9 649 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 GIMAP7Q8NHV1 300 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 SHKBP1Q8TBC3 707 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 FBLIM1Q8WUP2 373 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 MFSD14AQ96MC6 490 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 PCMTD2Q9NV79 361 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 AKAP2Q9Y2D5 859 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
PABPC1-216ENST00000520868 FAM95CA0A1B0GW59 222 aa8.95□□□□□ -0.98
PABPC1-216ENST00000520868 FGD1P98174 961 aa8.95□□□□□ -0.98
PABPC1-216ENST00000520868 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
PABPC1-216ENST00000520868 DAPK1P53355 1430 aa8.95□□□□□ -0.98
PABPC1-216ENST00000520868 SYNMO15061 1565 aa8.95□□□□□ -0.98
PABPC1-216ENST00000520868 AOC2O75106 756 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 KRTAP1-3Q8IUG1 177 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 PSMG3-AS1Q96PY0 264 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 KRT82Q9NSB4 513 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 PPM1HQ9ULR3 514 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 ANKRD30AQ9BXX3 1397 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 FAM135BQ49AJ0 1406 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 PRDM15P57071 1507 aaPredicted RBP8.94□□□□□ -0.98
PABPC1-216ENST00000520868 PIK3C2BO00750 1634 aa8.94□□□□□ -0.98
PABPC1-216ENST00000520868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.93□□□□□ -0.98
PABPC1-216ENST00000520868 WDR64B1ANS9 1081 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 P4HBP07237 508 aaKnown RBP8.93□□□□□ -0.98
PABPC1-216ENST00000520868 GSTP1P09211 210 aaKnown RBP8.93□□□□□ -0.98
PABPC1-216ENST00000520868 SLFN14P0C7P3 912 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 GRIK1P39086 918 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 FAM50AQ14320 339 aaKnown RBP8.93□□□□□ -0.98
PABPC1-216ENST00000520868 COL19A1Q14993 1142 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 NFKBIBQ15653 356 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 DYMQ7RTS9 669 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 FBXL6Q8N531 539 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 C3orf58Q8NDZ4 430 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 EZH1Q92800 747 aaPredicted RBP8.93□□□□□ -0.98
PABPC1-216ENST00000520868 FRMD6Q96NE9 622 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 CEP44Q9C0F1 390 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 AP4E1Q9UPM8 1137 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 ACTL7BQ9Y614 415 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 PTPN23Q9H3S7 1636 aa8.93□□□□□ -0.98
PABPC1-216ENST00000520868 EFCAB6Q5THR3 1501 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 COBLO75128 1261 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 ADAMTS4O75173 837 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 MAP7Q14244 749 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
PABPC1-216ENST00000520868 SETDB2Q96T68 719 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 EMILIN2Q9BXX0 1053 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 ZC3H12CQ9C0D7 883 aaKnown RBP8.92□□□□□ -0.98
PABPC1-216ENST00000520868 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 WWC3Q9ULE0 1092 aa8.92□□□□□ -0.98
PABPC1-216ENST00000520868 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
PABPC1-216ENST00000520868 F13BP05160 661 aa8.91□□□□□ -0.98
PABPC1-216ENST00000520868 LDHBP07195 334 aaKnown RBP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 ADMP35318 185 aa8.91□□□□□ -0.98
PABPC1-216ENST00000520868 CPSF6Q16630 551 aaKnown RBP eCLIP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 WDR89Q96FK6 387 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 GSX1Q9H4S2 264 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 CCDC86Q9H6F5 360 aaKnown RBP8.91□□□□□ -0.98
PABPC1-216ENST00000520868 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
PABPC1-216ENST00000520868 SAMM50Q9Y512 469 aa8.91□□□□□ -0.98
PABPC1-216ENST00000520868 NOS1P29475 1434 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 XIRP1Q702N8 1843 aaKnown RBP8.9□□□□□ -0.98
PABPC1-216ENST00000520868 NME2P22392 152 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 ASPAP45381 313 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 SULF2Q8IWU5 870 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 ANKRD24Q8TF21 1146 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 OSBPL7Q9BZF2 842 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 FAM8A1Q9UBU6 413 aa8.9□□□□□ -0.98
PABPC1-216ENST00000520868 LMTK2Q8IWU2 1503 aa8.9□□□□□ -0.99
PABPC1-216ENST00000520868 MSH6P52701 1360 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 TET3O43151 1660 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 KIAA1324LA8MWY0 1029 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-216ENST00000520868 LIG1P18858 919 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 RAB6AP20340 208 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 ARNTP27540 789 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 KIF4BQ2VIQ3 1234 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 PDZD3Q86UT5 571 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 KCNB2Q92953 911 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 NECAB3Q96P71 396 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-216ENST00000520868 METTL22Q9BUU2 404 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-216ENST00000520868 FAM105AQ9NUU6 356 aa8.89□□□□□ -0.99
PABPC1-216ENST00000520868 ANKRD33BA6NCL7 494 aa8.88□□□□□ -0.99
PABPC1-216ENST00000520868 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
PABPC1-216ENST00000520868 NFICP08651 508 aa8.88□□□□□ -0.99
PABPC1-216ENST00000520868 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
PABPC1-216ENST00000520868 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
PABPC1-216ENST00000520868 ACSS3Q9H6R3 686 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms