RNA–Protein interactions for RNA: ENST00000518059.5

UBXN8-204, Transcript of UBX domain protein 8, humanhuman

TSL 3

Gene UBXN8, Length 493 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-204ENST00000518059 CLIC4Q9Y696 253 aa8.6□□□□□ -1.03
UBXN8-204ENST00000518059 DLEC1Q9Y238 1755 aa8.6□□□□□ -1.03
UBXN8-204ENST00000518059 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 BAZ2AQ9UIF9 1905 aaKnown RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 KIF28PB7ZC32 967 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 USP17L21D6R901 530 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 PPP6R2O75170 966 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 MMP1P03956 469 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 FGRP09769 529 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CMA1P23946 247 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 U2AF2P26368 475 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 PRDX5P30044 214 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 ZNF165P49910 485 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 SEC23AQ15436 765 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CEP57L1Q8IYX8 460 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 TDRD7Q8NHU6 1098 aaKnown RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CTCFLQ8NI51 663 aaPredicted RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 TBC1D22AQ8WUA7 517 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CRAMP1Q96RY5 1269 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 FOXP1Q9H334 677 aaPredicted RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 GOLPH3LQ9H4A5 285 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 CBX8Q9HC52 389 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 DCP1AQ9NPI6 582 aaPredicted RBP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 LRRC4BQ9NT99 713 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBXN8-204ENST00000518059 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
UBXN8-204ENST00000518059 NAV1Q8NEY1 1877 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 BECN2A8MW95 431 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 ZNF500O60304 480 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 CUTAO60888 179 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 TRIM37O94972 964 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 BMP15O95972 392 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 KIF5BP33176 963 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 TPM4P67936 248 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 GPSM2P81274 684 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 RILPL1Q5EBL4 403 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 NOSTRINQ8IVI9 506 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 DIS3L2Q8IYB7 885 aaKnown RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 ENAHQ8N8S7 591 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 FLAD1Q8NFF5 587 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 ENGASEQ8NFI3 743 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 TIGD1Q96MW7 591 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 AIFM3Q96NN9 605 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 TMX4Q9H1E5 349 aaPredicted RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 DNAJC25Q9H1X3 360 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 MCM9Q9NXL9 1143 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 HOOK1Q9UJC3 728 aaKnown RBP8.58□□□□□ -1.04
UBXN8-204ENST00000518059 MYH6P13533 1939 aa8.58□□□□□ -1.04
UBXN8-204ENST00000518059 MROH7-TTC4A0A0A0MT08 1334 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 BRWD3Q6RI45 1802 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 MYH2Q9UKX2 1941 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 CYP2D7A0A087X1C5 515 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 A0A1B0GVL5 298 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 PRPF3O43395 683 aaKnown RBP8.57□□□□□ -1.04
UBXN8-204ENST00000518059 PRDM1O75626 825 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 KRT2P35908 639 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 SYKP43405 635 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 GNAQP50148 359 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 NDUFA8P51970 172 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 PPP4CP60510 307 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
UBXN8-204ENST00000518059 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
UBXN8-204ENST00000518059 NBPF11Q86T75 865 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 TXNRD3Q86VQ6 643 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
UBXN8-204ENST00000518059 CCDC34Q96HJ3 373 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 KAT14Q9H8E8 782 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 GJB4Q9NTQ9 266 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 FAM13BQ9NYF5 915 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 PODXL2Q9NZ53 605 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 ROBO3Q96MS0 1386 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 LRRC37AA6NMS7 1700 aa8.57□□□□□ -1.04
UBXN8-204ENST00000518059 C6orf229H3BNL8 230 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 POLRMTO00411 1230 aaKnown RBP8.56□□□□□ -1.04
UBXN8-204ENST00000518059 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
UBXN8-204ENST00000518059 IL1R1P14778 569 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 PFKFB1P16118 471 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 MARCKSP29966 332 aaPredicted RBP8.56□□□□□ -1.04
UBXN8-204ENST00000518059 DDR1Q08345 913 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 AXDND1Q5T1B0 1012 aaPredicted RBP8.56□□□□□ -1.04
UBXN8-204ENST00000518059 C12orf60Q5U649 245 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 ZNF772Q68DY9 489 aaPredicted RBP8.56□□□□□ -1.04
UBXN8-204ENST00000518059 TMTC3Q6ZXV5 915 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 DRC7Q8IY82 874 aa8.56□□□□□ -1.04
UBXN8-204ENST00000518059 TEX11Q8IYF3 940 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms