RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 CD99L2Q8TCZ2 262 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 APPBP2Q92624 585 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 ARMC5Q96C12 935 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 BOLA2Q9H3K6 86 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 SH2D4AQ9H788 454 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 DCP1AQ9NPI6 582 aaPredicted RBP7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 PALD1Q9ULE6 856 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 PTPN22Q9Y2R2 807 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 SALL3Q9BXA9 1300 aa7.23□□□□□ -1.25
SCARNA18.1-201ENST00000516330 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 CCDC85CA6NKD9 419 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 USP17L10C9JJH3 530 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 CAPN15O75808 1086 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 MX1P20591 662 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 HOXA7P31268 230 aaPredicted RBP7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 FCGRTP55899 365 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 BACE1P56817 501 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 DYNLL1P63167 89 aaKnown RBP7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 GPAT2Q6NUI2 795 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 GADL1Q6ZQY3 521 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 TMEM179Q6ZVK1 233 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 LCORLQ8N3X6 602 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 CCDC17Q96LX7 622 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 KIAA1683Q9H0B3 1180 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 R3HDMLQ9H3Y0 253 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 CABP5Q9NP86 173 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 TMOD4Q9NZQ9 345 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 PCDHB15Q9Y5E8 787 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
SCARNA18.1-201ENST00000516330 PLIN4Q96Q06 1357 aa7.21□□□□□ -1.25
SCARNA18.1-201ENST00000516330 BAZ2AQ9UIF9 1905 aaKnown RBP7.21□□□□□ -1.25
SCARNA18.1-201ENST00000516330 MBD4O95243 580 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 POLR3DP05423 398 aaPredicted RBP7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 OSBPP22059 807 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NT5C2P49902 561 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 HMGCS2P54868 508 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 IRX3P78415 501 aaPredicted RBP7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MLLT1Q03111 559 aaPredicted RBP7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SPP2Q13103 211 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 IRF5Q13568 498 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MTMR2Q13614 643 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CERKLQ49MI3 558 aaPredicted RBP7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLC9C1Q4G0N8 1177 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 LBX2Q6XYB7 198 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SMC5Q8IY18 1101 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLAIN1Q8ND83 568 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SDR42E1Q8WUS8 393 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SOCS4Q8WXH5 440 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 LPAR1Q92633 364 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ZNF333Q96JL9 665 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CRBNQ96SW2 442 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FEZ1Q99689 392 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ZNF287Q9HBT7 754 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MCM9Q9NXL9 1143 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MORF4L1Q9UBU8 362 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SYNPO2Q9UMS6 1093 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ZMYM6O95789 1325 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MYPNQ86TC9 1320 aa7.21□□□□□ -1.26
SCARNA18.1-201ENST00000516330 LAMA4Q16363 1823 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PARP14Q460N5 1801 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GDF11O95390 407 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GH2P01242 217 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SHMT1P34896 483 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ABCB5Q2M3G0 1257 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SBK1Q52WX2 424 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L2Q6R6M4 530 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 C16orf86Q6ZW13 317 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 EDC3Q96F86 508 aaKnown RBP7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 YTHDC1Q96MU7 727 aaKnown RBP7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ARHGEF10LQ9HCE6 1279 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 STAP2Q9UGK3 403 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SAP30BPQ9UHR5 308 aaKnown RBP7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 BRCA2P51587 3418 aa7.2□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TNPO2O14787 897 aaKnown RBP7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GPAA1O43292 621 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CYP2C8P10632 490 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 VCAM1P19320 739 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PSMC4P43686 418 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PLCD1P51178 756 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ICA1Q05084 483 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RRP1BQ14684 758 aaKnown RBP7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PPP4R3BQ5MIZ7 849 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TREML2Q5T2D2 321 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 C12orf60Q5U649 245 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NKX2-3Q8TAU0 364 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PXYLP1Q8TE99 480 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 COA7Q96BR5 231 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 EVI5LQ96CN4 794 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TRIM47Q96LD4 638 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FSD1Q9BTV5 496 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NACAP1Q9BZK3 213 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PUS7LQ9H0K6 701 aaKnown RBP7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RWDD1Q9H446 243 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms