RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 AS3MTQ9HBK9 375 aa21.46■■□□□ 1.03
SFXN1-212ENST00000515791 PAG1Q9NWQ8 432 aa21.46■■□□□ 1.03
SFXN1-212ENST00000515791 MAGEB6P1A0A0J9YX57 407 aa21.45■■□□□ 1.02
SFXN1-212ENST00000515791 FMNL1O95466 1100 aaPredicted RBP21.45■■□□□ 1.02
SFXN1-212ENST00000515791 CHGBP05060 677 aa21.45■■□□□ 1.02
SFXN1-212ENST00000515791 BACE1P56817 501 aa21.45■■□□□ 1.02
SFXN1-212ENST00000515791 EVX2Q03828 476 aa21.45■■□□□ 1.02
SFXN1-212ENST00000515791 NAV1Q8NEY1 1877 aa21.45■■□□□ 1.02
SFXN1-212ENST00000515791 EN2P19622 333 aaPredicted RBP21.44■■□□□ 1.02
SFXN1-212ENST00000515791 ADD2P35612 726 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 GABPAQ06546 454 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 MTMR2Q13614 643 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 NBPF11Q86T75 865 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 LCORLQ8N3X6 602 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 SERPINB13Q9UIV8 391 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 GABRQQ9UN88 632 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
SFXN1-212ENST00000515791 KIAA0100Q14667 2235 aaKnown RBP21.44■■□□□ 1.02
SFXN1-212ENST00000515791 SHMT1P34896 483 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 PRKCZQ05513 592 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 TTC6Q86TZ1 520 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
SFXN1-212ENST00000515791 MYPNQ86TC9 1320 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 PDE4DIPQ5VU43 2346 aa21.43■■□□□ 1.02
SFXN1-212ENST00000515791 HOXD10P28358 340 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 HOXA7P31268 230 aaPredicted RBP21.42■■□□□ 1.02
SFXN1-212ENST00000515791 FCGRTP55899 365 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 FAM110CQ1W6H9 321 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 ANKRD13CQ8N6S4 541 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 SMCR8Q8TEV9 937 aaPredicted RBP21.42■■□□□ 1.02
SFXN1-212ENST00000515791 DCP1AQ9NPI6 582 aaPredicted RBP21.42■■□□□ 1.02
SFXN1-212ENST00000515791 EMILIN3Q9NT22 766 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 PNMA3Q9UL41 463 aa21.42■■□□□ 1.02
SFXN1-212ENST00000515791 C19orf81C9J6K1 198 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 USP17L10C9JJH3 530 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 GH2P01242 217 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 SDR42E1Q8WUS8 393 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 CRNKL1Q9BZJ0 848 aaKnown RBP21.41■■□□□ 1.02
SFXN1-212ENST00000515791 MYH7P12883 1935 aa21.41■■□□□ 1.02
SFXN1-212ENST00000515791 GRK4P32298 578 aa21.4■■□□□ 1.02
SFXN1-212ENST00000515791 GUCY1A2P33402 732 aa21.4■■□□□ 1.02
SFXN1-212ENST00000515791 RRP1P56182 461 aaKnown RBP21.4■■□□□ 1.02
SFXN1-212ENST00000515791 MTFR1Q15390 333 aa21.4■■□□□ 1.02
SFXN1-212ENST00000515791 POTEEQ6S8J3 1075 aa21.4■■□□□ 1.02
SFXN1-212ENST00000515791 ARMT1Q9H993 441 aa21.4■■□□□ 1.02
SFXN1-212ENST00000515791 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.02
SFXN1-212ENST00000515791 PRKAB2O43741 272 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 GCLCP48506 637 aaPredicted RBP21.39■■□□□ 1.01
SFXN1-212ENST00000515791 PABPC4Q13310 644 aaKnown RBP eCLIP21.39■■□□□ 1.01
SFXN1-212ENST00000515791 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 RAET1EQ8TD07 263 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 P2RX7Q99572 595 aaKnown RBP21.39■■□□□ 1.01
SFXN1-212ENST00000515791 TMEM106CQ9BVX2 250 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 MORF4L1Q9UBU8 362 aa21.39■■□□□ 1.01
SFXN1-212ENST00000515791 CYP2D6P10635 497 aa21.38■■□□□ 1.01
SFXN1-212ENST00000515791 FLT3LGP49771 235 aa21.38■■□□□ 1.01
SFXN1-212ENST00000515791 CERKLQ49MI3 558 aaPredicted RBP21.38■■□□□ 1.01
SFXN1-212ENST00000515791 C12orf42Q96LP6 360 aa21.38■■□□□ 1.01
SFXN1-212ENST00000515791 MCM9Q9NXL9 1143 aa21.38■■□□□ 1.01
SFXN1-212ENST00000515791 PLXNB2O15031 1838 aa21.37■■□□□ 1.01
SFXN1-212ENST00000515791 SMIM22K7EJ46 135 aa21.37■■□□□ 1.01
SFXN1-212ENST00000515791 MBD4O95243 580 aa21.37■■□□□ 1.01
SFXN1-212ENST00000515791 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
SFXN1-212ENST00000515791 POLR3DP05423 398 aaPredicted RBP21.37■■□□□ 1.01
SFXN1-212ENST00000515791 IRF5Q13568 498 aa21.37■■□□□ 1.01
SFXN1-212ENST00000515791 TMOD4Q9NZQ9 345 aa21.37■■□□□ 1.01
SFXN1-212ENST00000515791 BAZ2AQ9UIF9 1905 aaKnown RBP21.36■■□□□ 1.01
SFXN1-212ENST00000515791 TNPO2O14787 897 aaKnown RBP21.36■■□□□ 1.01
SFXN1-212ENST00000515791 PEX10O60683 326 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 ABCB5Q2M3G0 1257 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 ACER1Q8TDN7 264 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 SHISA4Q96DD7 197 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 PUS7LQ9H0K6 701 aaKnown RBP21.36■■□□□ 1.01
SFXN1-212ENST00000515791 TXNRD2Q9NNW7 524 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 ATP8A2Q9NTI2 1148 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 GJD2Q9UKL4 321 aa21.36■■□□□ 1.01
SFXN1-212ENST00000515791 HERVK_113P62684 666 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 PRPF38BQ5VTL8 546 aaKnown RBP21.35■■□□□ 1.01
SFXN1-212ENST00000515791 TSHZ3Q63HK5 1081 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 USP17L2Q6R6M4 530 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 SLAIN1Q8ND83 568 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 PXYLP1Q8TE99 480 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.35■■□□□ 1.01
SFXN1-212ENST00000515791 KIAA1683Q9H0B3 1180 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 RBPJLQ9UBG7 517 aa21.35■■□□□ 1.01
SFXN1-212ENST00000515791 ADCY3O60266 1144 aa21.34■■□□□ 1.01
SFXN1-212ENST00000515791 RAB3GAP1Q15042 981 aa21.34■■□□□ 1.01
SFXN1-212ENST00000515791 SLC44A5Q8NCS7 719 aa21.34■■□□□ 1.01
SFXN1-212ENST00000515791 ELNP15502 786 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 IRX3P78415 501 aaPredicted RBP21.33■■□□□ 1.01
SFXN1-212ENST00000515791 SEPT2Q15019 361 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 Q3C1V9 767 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 C12orf60Q5U649 245 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 KBTBD3Q8NAB2 608 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 TAOK2Q9UL54 1235 aa21.33■■□□□ 1.01
SFXN1-212ENST00000515791 CYP2D7A0A087X1C5 515 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms