RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CTNND1O60716 968 aaKnown RBP24.81■■□□□ 1.56
LSM6-207ENST00000515311 CELF2O95319 508 aaKnown RBP24.81■■□□□ 1.56
LSM6-207ENST00000515311 IREB2P48200 963 aaKnown RBP24.81■■□□□ 1.56
LSM6-207ENST00000515311 ARMC9Q7Z3E5 817 aa24.81■■□□□ 1.56
LSM6-207ENST00000515311 RALYLQ86SE5 291 aaKnown RBP24.81■■□□□ 1.56
LSM6-207ENST00000515311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.81■■□□□ 1.562e-6■■■□□ 15.6
LSM6-207ENST00000515311 WRNIP1Q96S55 665 aa24.81■■□□□ 1.56
LSM6-207ENST00000515311 ZNF408Q9H9D4 720 aa24.81■■□□□ 1.56
LSM6-207ENST00000515311 TOMM22Q9NS69 142 aa24.81■■□□□ 1.56
LSM6-207ENST00000515311 GINM1Q9NU53 330 aa24.81■■□□□ 1.56
LSM6-207ENST00000515311 PLIN4Q96Q06 1357 aa24.8■■□□□ 1.56
LSM6-207ENST00000515311 CAP2P40123 477 aa24.8■■□□□ 1.56
LSM6-207ENST00000515311 RRP12Q5JTH9 1297 aaKnown RBP24.8■■□□□ 1.56
LSM6-207ENST00000515311 ANGEL1Q9UNK9 670 aaKnown RBP24.8■■□□□ 1.56
LSM6-207ENST00000515311 UNCXA6NJT0 531 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 B4E1Z4 1266 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 RANBP6O60518 1105 aaKnown RBP24.79■■□□□ 1.56
LSM6-207ENST00000515311 HMGB1P09429 215 aaKnown RBP24.79■■□□□ 1.56
LSM6-207ENST00000515311 PSMA5P28066 241 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 PRKG1Q13976 671 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 TTLL12Q14166 644 aaPredicted RBP24.79■■□□□ 1.56
LSM6-207ENST00000515311 RRP1BQ14684 758 aaKnown RBP24.79■■□□□ 1.56
LSM6-207ENST00000515311 ADCK5Q3MIX3 580 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 CST9Q5W186 159 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 NEK1Q96PY6 1258 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 TM6SF1Q9BZW5 370 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 GBA2Q9HCG7 927 aaPredicted RBP24.79■■□□□ 1.56
LSM6-207ENST00000515311 FZD1Q9UP38 647 aa24.79■■□□□ 1.56
LSM6-207ENST00000515311 KDM4AO75164 1064 aa24.78■■□□□ 1.56
LSM6-207ENST00000515311 ABCB5Q2M3G0 1257 aa24.78■■□□□ 1.56
LSM6-207ENST00000515311 NOL9Q5SY16 702 aaKnown RBP24.78■■□□□ 1.56
LSM6-207ENST00000515311 MB21D2Q8IYB1 491 aaPredicted RBP24.78■■□□□ 1.56
LSM6-207ENST00000515311 C2orf69Q8N8R5 385 aa24.78■■□□□ 1.56
LSM6-207ENST00000515311 JAKMIP1Q96N16 626 aaKnown RBP24.78■■□□□ 1.56
LSM6-207ENST00000515311 TSPY2A6NKD2 308 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 TSPY3P0CV98 308 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 TSPY8P0CW00 308 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 AKR1B1P15121 316 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 INPP5BP32019 993 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 MAP3K9P80192 1104 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 TFAP4Q01664 338 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 TMEM179Q6ZVK1 233 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 SCYL3Q8IZE3 742 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 NEDD1Q8NHV4 660 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 ZBTB21Q9ULJ3 1066 aa24.77■■□□□ 1.56
LSM6-207ENST00000515311 GDF11O95390 407 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 ASNSP08243 561 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 MCM5P33992 734 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 FAM47AQ5JRC9 791 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 LDLRAD1Q5T700 205 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.76■■□□□ 1.55
LSM6-207ENST00000515311 ANKRD13AQ8IZ07 590 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 CABP5Q9NP86 173 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 ZSWIM5Q9P217 1185 aa24.76■■□□□ 1.55
LSM6-207ENST00000515311 MPHOSPH10O00566 681 aaKnown RBP24.75■■□□□ 1.55
LSM6-207ENST00000515311 GH2P01242 217 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 VGLL4Q14135 290 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 MOB2Q70IA6 237 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 NKX2-3Q8TAU0 364 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 ZKSCAN4Q969J2 545 aaPredicted RBP24.75■■□□□ 1.55
LSM6-207ENST00000515311 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.75■■□□□ 1.55
LSM6-207ENST00000515311 ZSWIM6Q9HCJ5 1215 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 TCP11L1Q9NUJ3 509 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 CSADQ9Y600 493 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 WDR19Q8NEZ3 1342 aa24.75■■□□□ 1.55
LSM6-207ENST00000515311 CASTP20810 708 aaKnown RBP24.74■■□□□ 1.55
LSM6-207ENST00000515311 JAG1P78504 1218 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 BLOC1S2Q6QNY1 142 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 CYB5R4Q7L1T6 521 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 DHX32Q7L7V1 743 aaKnown RBP24.74■■□□□ 1.55
LSM6-207ENST00000515311 IQCA1Q86XH1 822 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 KIF2CQ99661 725 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 MTA3Q9BTC8 594 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 PICK1Q9NRD5 415 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 PHIPQ8WWQ0 1821 aa24.74■■□□□ 1.55
LSM6-207ENST00000515311 IGKV6D-41A0A0C4DH26 115 aa24.73■■□□□ 1.55
LSM6-207ENST00000515311 UBE2Q2LH0YL09 131 aa24.73■■□□□ 1.55
LSM6-207ENST00000515311 SHROOM1Q2M3G4 852 aaPredicted RBP24.73■■□□□ 1.55
LSM6-207ENST00000515311 PPP4R3BQ5MIZ7 849 aa24.73■■□□□ 1.55
LSM6-207ENST00000515311 CYP46A1Q9Y6A2 500 aa24.73■■□□□ 1.55
LSM6-207ENST00000515311 SNCAIPQ9Y6H5 919 aa24.73■■□□□ 1.55
LSM6-207ENST00000515311 RPS6KB1P23443 525 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 GUCY1A2P33402 732 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 ANTXR2P58335 489 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 COL9A3Q14050 684 aaPredicted RBP24.72■■□□□ 1.55
LSM6-207ENST00000515311 CCDC178Q5BJE1 867 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 RUFY3Q7L099 469 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 UBAC1Q9BSL1 405 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 KANSL2Q9H9L4 492 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 IL17RBQ9NRM6 502 aa24.72■■□□□ 1.55
LSM6-207ENST00000515311 TMEM88BA6NKF7 163 aa24.71■■□□□ 1.55
LSM6-207ENST00000515311 PRC1O43663 620 aa24.71■■□□□ 1.55
LSM6-207ENST00000515311 EXOSC10Q01780 885 aaKnown RBP24.71■■□□□ 1.55
LSM6-207ENST00000515311 SEPT2Q15019 361 aa24.71■■□□□ 1.55
LSM6-207ENST00000515311 SART3Q15020 963 aaKnown RBP24.71■■□□□ 1.55
LSM6-207ENST00000515311 ZSCAN10Q96SZ4 725 aaPredicted RBP24.71■■□□□ 1.55
LSM6-207ENST00000515311 MYH4Q9Y623 1939 aa24.71■■□□□ 1.55
LSM6-207ENST00000515311 PTPRAP18433 802 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 NOVP48745 357 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 RAB3GAP1Q15042 981 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms