RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 TSPY2A6NKD2 308 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
AP3S1-208ENST00000515066 TBC1D12O60347 775 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 NMT2O60551 498 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 TFAP4Q01664 338 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 NOL8Q76FK4 1167 aaKnown RBP19.8■□□□□ 0.76
AP3S1-208ENST00000515066 BRF1Q92994 677 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 TMEM87BQ96K49 555 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 MTA3Q9BTC8 594 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 PAPPA2Q9BXP8 1791 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 SENP2Q9HC62 589 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
AP3S1-208ENST00000515066 POTEIP0CG38 1075 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 POTEJP0CG39 1038 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 RRP1BQ14684 758 aaKnown RBP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 SEC23AQ15436 765 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 NBPF12Q5TAG4 269 aaPredicted RBP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 PNMA8AQ86V59 439 aaPredicted RBP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 ANGEL1Q9UNK9 670 aaKnown RBP19.79■□□□□ 0.76
AP3S1-208ENST00000515066 PPP2R3BQ9Y5P8 575 aa19.79■□□□□ 0.76
AP3S1-208ENST00000515066 TNKSO95271 1327 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 K7ELQ4 463 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 LARGE1O95461 756 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 AKR1B1P15121 316 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 MCM2P49736 904 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 SHROOM1Q2M3G4 852 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 EAPPQ56P03 285 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 PRAMEF18Q5VWM3 479 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 MIGA2Q7L4E1 593 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 HSCBQ8IWL3 235 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 ENAHQ8N8S7 591 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 DCPSQ96C86 337 aaKnown RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 ZSCAN10Q96SZ4 725 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 RRAGCQ9HB90 399 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 OTOFQ9HC10 1997 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 TSPY3P0CV98 308 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 TSPY8P0CW00 308 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 EVCP57679 992 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 ANKRD1Q15327 319 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 RCSD1Q6JBY9 416 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 DLK2Q6UY11 383 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 IQCA1Q86XH1 822 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
AP3S1-208ENST00000515066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
AP3S1-208ENST00000515066 DOCK1Q14185 1865 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 ADM5C9JUS6 153 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 LIFRP42702 1097 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 FGD1P98174 961 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 APOBRQ0VD83 1088 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 TMEM67Q5HYA8 995 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 KRT26Q7Z3Y9 468 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 SGMS1Q86VZ5 419 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 TMX3Q96JJ7 454 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 UBAC1Q9BSL1 405 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 LIMCH1Q9UPQ0 1083 aa19.77■□□□□ 0.76
AP3S1-208ENST00000515066 JAG1P78504 1218 aa19.76■□□□□ 0.75
AP3S1-208ENST00000515066 SULF1Q8IWU6 871 aa19.76■□□□□ 0.75
AP3S1-208ENST00000515066 IPO9Q96P70 1041 aaKnown RBP19.76■□□□□ 0.75
AP3S1-208ENST00000515066 TRIM34Q9BYJ4 488 aa19.76■□□□□ 0.75
AP3S1-208ENST00000515066 BRPF3Q9ULD4 1205 aa19.76■□□□□ 0.75
AP3S1-208ENST00000515066 IGKV6D-41A0A0C4DH26 115 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 BECN1Q14457 450 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 SART3Q15020 963 aaKnown RBP19.75■□□□□ 0.75
AP3S1-208ENST00000515066 ME3Q16798 604 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 CERKLQ49MI3 558 aaPredicted RBP19.75■□□□□ 0.75
AP3S1-208ENST00000515066 CCDC17Q96LX7 622 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 PHF20L1A8MW92 1017 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 NOVP48745 357 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 ST3GAL1Q11201 340 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 ZNF526Q8TF50 670 aaPredicted RBP19.75■□□□□ 0.75
AP3S1-208ENST00000515066 CEP95Q96GE4 821 aa19.75■□□□□ 0.75
AP3S1-208ENST00000515066 GDF11O95390 407 aa19.74■□□□□ 0.75
AP3S1-208ENST00000515066 GUCY1A2P33402 732 aa19.74■□□□□ 0.75
AP3S1-208ENST00000515066 WTAPQ15007 396 aa19.74■□□□□ 0.75
AP3S1-208ENST00000515066 CLEC10AQ8IUN9 316 aa19.74■□□□□ 0.75
AP3S1-208ENST00000515066 PHIPQ8WWQ0 1821 aa19.73■□□□□ 0.75
AP3S1-208ENST00000515066 ERICH2A1L162 156 aa19.73■□□□□ 0.75
AP3S1-208ENST00000515066 APOA5Q6Q788 366 aa19.73■□□□□ 0.75
AP3S1-208ENST00000515066 ANKS1AQ92625 1134 aa19.73■□□□□ 0.75
AP3S1-208ENST00000515066 KLF18A0A0U1RQI7 1052 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 IFIT1BQ5T764 474 aaKnown RBP19.72■□□□□ 0.75
AP3S1-208ENST00000515066 USP48Q86UV5 1035 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 DGKHQ86XP1 1220 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 GLIS2Q9BZE0 524 aaPredicted RBP19.72■□□□□ 0.75
AP3S1-208ENST00000515066 MTMR4Q9NYA4 1195 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 FZD1Q9UP38 647 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 HPS5Q9UPZ3 1129 aa19.72■□□□□ 0.75
AP3S1-208ENST00000515066 MPHOSPH10O00566 681 aaKnown RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 PDIA3P30101 505 aaKnown RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 CUL4AQ13619 759 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 ABCB5Q2M3G0 1257 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms