RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.06
CCDC30-214ENST00000514642 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
CCDC30-214ENST00000514642 DNM3Q9UQ16 869 aa8.4□□□□□ -1.06
CCDC30-214ENST00000514642 EEF2P13639 858 aaKnown RBP8.4□□□□□ -1.06
CCDC30-214ENST00000514642 TEKT3Q9BXF9 490 aa8.4□□□□□ -1.06
CCDC30-214ENST00000514642 CIAO1O76071 339 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 KIF4BQ2VIQ3 1234 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 DHX58Q96C10 678 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 GCNAQ96QF7 691 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 RIOK1Q9BRS2 568 aaKnown RBP8.4□□□□□ -1.07
CCDC30-214ENST00000514642 STK25O00506 426 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 XPOTO43592 962 aaKnown RBP8.4□□□□□ -1.07
CCDC30-214ENST00000514642 SPAG1Q07617 926 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 CENPHQ9H3R5 247 aa8.4□□□□□ -1.07
CCDC30-214ENST00000514642 NCAPD2Q15021 1401 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 POTEB2H3BUK9 544 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 UQCRHP07919 91 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 CALCRLQ16602 461 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 AOC3Q16853 763 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 CCDC14Q49A88 953 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 ARHGEF37A1IGU5 675 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 GNAT1P11488 350 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 GREM2Q9H772 168 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 TSHZ2Q9NRE2 1034 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 RABGAP1Q9Y3P9 1069 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 FRMPD2Q68DX3 1309 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 KRT19P08727 400 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PCP11498 1178 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 CASQ1P31415 396 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PRPF4BQ13523 1007 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 FAM47AQ5JRC9 791 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 CFAP58Q5T655 872 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 RUFY3Q7L099 469 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 NAA15Q9BXJ9 866 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 RNASELQ05823 741 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 BARGINQ6ZT62 677 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 METTL23Q86XA0 190 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 SLFN12Q8IYM2 578 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 ZNF277Q9NRM2 450 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 TLR3O15455 904 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 DAPK3O43293 454 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PIK3AP1Q6ZUJ8 805 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
CCDC30-214ENST00000514642 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 ANO3Q9BYT9 981 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
CCDC30-214ENST00000514642 PRDM1O75626 825 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 MCM3P25205 808 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 COPB2P35606 906 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 IGBP1P78318 339 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 FAM102BQ5T8I3 360 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 DCTPP1Q9H773 170 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 PI4KBQ9UBF8 816 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 KDM3AQ9Y4C1 1321 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 CCDC129Q6ZRS4 1044 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 NBPF11Q86T75 865 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 FAM160B2Q86V87 743 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 NECAB1Q8N987 351 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 KLHDC4Q8TBB5 520 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 ARHGEF40Q8TER5 1519 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 SLU7O95391 586 aaKnown RBP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 RXRAP19793 462 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 SFPQP23246 707 aaKnown RBP eCLIP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 C20orf194Q5TEA3 1177 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 IL17REQ8NFR9 667 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 MICAL1Q8TDZ2 1067 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 IWS1Q96ST2 819 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 BSDC1Q9NW68 430 aaPredicted RBP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 GOLGA6L10A0A0M3HER8 536 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 SORBS3O60504 671 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 ZNF174Q15697 407 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 USP17L2Q6R6M4 530 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 CPLX3Q8WVH0 158 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 PSTPIP2Q9H939 334 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 KCNQ3O43525 872 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 TNNC2P02585 160 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 CNNM4Q6P4Q7 775 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 AKT3Q9Y243 479 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
CCDC30-214ENST00000514642 IGSF1Q8N6C5 1336 aa8.38□□□□□ -1.07
CCDC30-214ENST00000514642 N4BP3O15049 544 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 TXKP42681 527 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 MYCT1Q8N699 235 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 PRDM15P57071 1507 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 CDK12Q9NYV4 1490 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-214ENST00000514642 SPATA31A1Q5TZJ5 1347 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
CCDC30-214ENST00000514642 TTLL1O95922 423 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms