RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 ECE1P42892 770 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 METAP2P50579 478 aaKnown RBP eCLIP10.41□□□□□ -0.74
COPG1-209ENST00000514478 ST3GAL1Q11201 340 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 RAB3GAP1Q15042 981 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
COPG1-209ENST00000514478 ZSCAN29Q8IWY8 852 aaPredicted RBP10.41□□□□□ -0.74
COPG1-209ENST00000514478 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 AGBL3Q8NEM8 1001 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 IGDCC4Q8TDY8 1250 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 ZSCAN10Q96SZ4 725 aaPredicted RBP10.41□□□□□ -0.74
COPG1-209ENST00000514478 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 OSBPL5Q9H0X9 879 aaPredicted RBP10.41□□□□□ -0.74
COPG1-209ENST00000514478 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
COPG1-209ENST00000514478 LY9Q9HBG7 655 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
COPG1-209ENST00000514478 KIF3AQ9Y496 699 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 SLC12A7Q9Y666 1083 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 GJA3Q9Y6H8 435 aa10.41□□□□□ -0.74
COPG1-209ENST00000514478 DTNBO60941 627 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 WDHD1O75717 1129 aaPredicted RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 LIFRP42702 1097 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 CDK8P49336 464 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 NT5C2P49902 561 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 PLCD1P51178 756 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 CACNB3P54284 484 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 TFAP4Q01664 338 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 TCP10Q12799 353 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 CCDC178Q5BJE1 867 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 IFIT1BQ5T764 474 aaKnown RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 C16orf86Q6ZW13 317 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 CCDC144CPQ8IYA2 1237 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 CRACR2BQ8N4Y2 399 aaPredicted RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 NUP133Q8WUM0 1156 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 GBP4Q96PP9 640 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 LLPHQ9BRT6 129 aaKnown RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 DDX4Q9NQI0 724 aaKnown RBP10.4□□□□□ -0.74
COPG1-209ENST00000514478 PCDH10Q9P2E7 1040 aa10.4□□□□□ -0.74
COPG1-209ENST00000514478 POLR2AP24928 1970 aaKnown RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 WDR33Q9C0J8 1336 aaKnown RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 VPS37CA5D8V6 355 aaPredicted RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 MYO1BO43795 1136 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 JAK2O60674 1132 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 FGRP09769 529 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 RXRAP19793 462 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 PDCP20941 246 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 FOSBP53539 338 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 EVCP57679 992 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 HMGN5P82970 282 aaKnown RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 DEFB115Q30KQ5 88 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 CATIPQ7Z7H3 387 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 SLC44A5Q8NCS7 719 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 PRMT6Q96LA8 375 aaPredicted RBP10.39□□□□□ -0.75
COPG1-209ENST00000514478 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 VEZTQ9HBM0 779 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
COPG1-209ENST00000514478 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 PTPDC1A2A3K4 754 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 H3BQV1 296 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 STX6O43752 255 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 CDKL5O76039 1030 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 RPS12P25398 132 aaKnown RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 NFIAQ12857 509 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 PKP1Q13835 747 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 RTN1Q16799 776 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 RBM26Q5T8P6 1007 aaKnown RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 ZNF654Q8IZM8 581 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 ENAHQ8N8S7 591 aaPredicted RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 NSUN7Q8NE18 718 aaKnown RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 GMLQ99445 158 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 IDI2Q9BXS1 227 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 KAT14Q9H8E8 782 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 SWAP70Q9UH65 585 aa10.38□□□□□ -0.75
COPG1-209ENST00000514478 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 GREB1LQ9C091 1923 aaPredicted RBP10.38□□□□□ -0.75
COPG1-209ENST00000514478 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
COPG1-209ENST00000514478 GOLGA6L22H0YM25 854 aa10.37□□□□□ -0.75
COPG1-209ENST00000514478 MPHOSPH10O00566 681 aaKnown RBP10.37□□□□□ -0.75
COPG1-209ENST00000514478 FOXN1O15353 648 aa10.37□□□□□ -0.75
COPG1-209ENST00000514478 NMT2O60551 498 aa10.37□□□□□ -0.75
COPG1-209ENST00000514478 ENTPD3O75355 529 aa10.37□□□□□ -0.75
COPG1-209ENST00000514478 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
COPG1-209ENST00000514478 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms