RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
CPNE4-211ENST00000514439 XDHP47989 1333 aa9.46□□□□□ -0.9
CPNE4-211ENST00000514439 FAM237AA0A1B0GTK4 181 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 CUTAO60888 179 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 CYP2D6P10635 497 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 SYKP43405 635 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 TOB1P50616 345 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 FUT2Q10981 343 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 TROAPQ12815 778 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 NR5A1Q13285 461 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 ZRSR1Q15695 479 aaKnown RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 DPCR1Q3MIW9 517 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 RESP18Q5W5W9 173 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 AOPEPQ8N6M6 819 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 NAT10Q9H0A0 1025 aaKnown RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 MYH2Q9UKX2 1941 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 NMT2O60551 498 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 DDAH1O94760 285 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 PLEKHA8P1O95397 391 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 CDC25BP30305 580 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 PKN1Q16512 942 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 SBK1Q52WX2 424 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 CCDC186Q7Z3E2 898 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 OXER1Q8TDS5 423 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 RBM28Q9NW13 759 aaKnown RBP9.45□□□□□ -0.9
CPNE4-211ENST00000514439 CLIP2Q9UDT6 1046 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 NRBP1Q9UHY1 535 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 PYCARDQ9ULZ3 195 aa9.45□□□□□ -0.9
CPNE4-211ENST00000514439 hCG_1642624A0A1W2PR95 340 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 BIN1O00499 593 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 LDHBP07195 334 aaKnown RBP9.44□□□□□ -0.9
CPNE4-211ENST00000514439 CALM1P0DP23 149 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 CALM2P0DP24 149 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 CALM3P0DP25 149 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 GYS1P13807 737 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 HSPA1LP34931 641 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 RILPL1Q5EBL4 403 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 FAM47AQ5JRC9 791 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
CPNE4-211ENST00000514439 KIAA1524Q8TCG1 905 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 RPGRQ92834 1020 aaKnown RBP9.44□□□□□ -0.9
CPNE4-211ENST00000514439 SPTLC3Q9NUV7 552 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 MCM9Q9NXL9 1143 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 LAMB1P07942 1786 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 KIAA1551Q9HCM1 1747 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
CPNE4-211ENST00000514439 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 PDE4BQ07343 736 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 SLC4A8Q2Y0W8 1093 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 CRY2Q49AN0 593 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 TMTC3Q6ZXV5 915 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 ZNF804AQ7Z570 1209 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 CERKQ8TCT0 537 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 VPS54Q9P1Q0 977 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
CPNE4-211ENST00000514439 PCDHB6Q9Y5E3 794 aa9.44□□□□□ -0.9
CPNE4-211ENST00000514439 SERPINB2P05120 415 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 TPM2P07951 284 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 XBP1P17861 261 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 TERF1P54274 439 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 NLRP12P59046 1061 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
CPNE4-211ENST00000514439 GPSM2P81274 684 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 GRIK5Q16478 980 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
CPNE4-211ENST00000514439 BPIFA3Q9BQP9 254 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
CPNE4-211ENST00000514439 DLEC1Q9Y238 1755 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 UBR3Q6ZT12 1888 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 USP5P45974 858 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 ST5P78524 1137 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 GRIN1Q05586 938 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 SPECC1Q5M775 1068 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 SH3RF3Q8TEJ3 882 aaPredicted RBP9.43□□□□□ -0.9
CPNE4-211ENST00000514439 PHF20Q9BVI0 1012 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 TUBE1Q9UJT0 475 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
CPNE4-211ENST00000514439 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
CPNE4-211ENST00000514439 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 IGSF3O75054 1194 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 UFL1O94874 794 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 PTPREP23469 700 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 KRT2P35908 639 aa9.42□□□□□ -0.9
CPNE4-211ENST00000514439 GSTO1P78417 241 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms