RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PREX2Q70Z35 1606 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 PLXNC1O60486 1568 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 NLRP1Q9C000 1473 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 KRT1P04264 644 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 CD96P40200 585 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 USP5P45974 858 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 HNRNPMP52272 730 aaKnown RBP eCLIP5.99□□□□□ -1.455e-6■■■□□ 18.5
PDLIM5-218ENST00000513341 LATS2Q9NRM7 1088 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 SEPT3Q9UH03 358 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 PPP1R9AQ9ULJ8 1098 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 PLAGL2Q9UPG8 496 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 U3KQE9 123 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 RNF17Q9BXT8 1623 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 FAM135AQ9P2D6 1515 aa5.99□□□□□ -1.45
PDLIM5-218ENST00000513341 SYNMO15061 1565 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 PLEKHH2Q8IVE3 1493 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 METTL12A8MUP2 240 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 TMPRSS2O15393 492 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 AFMP43652 599 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 EIF1AXP47813 144 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 CDK5R2Q13319 367 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 AP3B2Q13367 1082 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 ZNF772Q68DY9 489 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 SYDE1Q6ZW31 735 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 ATXN3LQ9H3M9 355 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 ZNF777Q9ULD5 760 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 CTNND2Q9UQB3 1225 aa5.98□□□□□ -1.45
PDLIM5-218ENST00000513341 UGGT1Q9NYU2 1555 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 DHX29Q7Z478 1369 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 GLI1P08151 1106 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 ASB11Q8WXH4 323 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 TCF12Q99081 682 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 ZFYVE28Q9HCC9 887 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 ATP7AQ04656 1500 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 RTEL1-TNFRSF6BF6WH68 1400 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 IQGAP1P46940 1657 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 ADGBQ8N7X0 1667 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 WASHC2CQ9Y4E1 1318 aa5.97□□□□□ -1.45
PDLIM5-218ENST00000513341 CDC42BPAQ5VT25 1732 aa5.96□□□□□ -1.45
PDLIM5-218ENST00000513341 PZPP20742 1482 aa5.96□□□□□ -1.45
PDLIM5-218ENST00000513341 STRCP1A6NGW2 1772 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 KDM5DQ9BY66 1539 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 ECEL1O95672 775 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 NPR3P17342 541 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 GRIA4P48058 902 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 ECM1Q16610 540 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 SMYD4Q8IYR2 804 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 LIN37Q96GY3 246 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 CFDP1Q9UEE9 299 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 POLIQ9UNA4 740 aa5.96□□□□□ -1.46
PDLIM5-218ENST00000513341 GPATCH8Q9UKJ3 1502 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 KIF3BO15066 747 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 C1QTNF9P0C862 333 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 PTPN12Q05209 780 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 GALNT12Q8IXK2 581 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 FANCD2OSQ96PS1 177 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 FOXD3Q9UJU5 478 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 INO80Q9ULG1 1556 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 CCDC18Q5T9S5 1454 aa5.95□□□□□ -1.46
PDLIM5-218ENST00000513341 JCADQ9P266 1359 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 A0A1W2PP55 124 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 IGF2BP3O00425 579 aaKnown RBP eCLIP5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 NFIBO00712 420 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 SLFN14P0C7P3 912 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 ATP2B4P23634 1241 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 ITPKAP23677 461 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 HNRNPUQ00839 825 aaKnown RBP eCLIP5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 ID3Q02535 119 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 SPRED3Q2MJR0 410 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 ARHGAP27Q6ZUM4 889 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 FBXO15Q8NCQ5 510 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 LIN7BQ9HAP6 207 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 SLAIN2Q9P270 581 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 PCOLCE2Q9UKZ9 415 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 JAG2Q9Y219 1238 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 PCDHGC5Q9Y5F6 944 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 ARHGAP35Q9NRY4 1499 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 SPATA31A6Q5VVP1 1343 aa5.94□□□□□ -1.46
PDLIM5-218ENST00000513341 XIRP1Q702N8 1843 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 LEFTY1O75610 366 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 KCNA6P17658 529 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 MPSTP25325 297 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 PDE3AQ14432 1141 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 KIF4BQ2VIQ3 1234 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 KIAA0319Q5VV43 1072 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 PRR23BQ6ZRT6 265 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 TXNDC2Q86VQ3 553 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 DISC1Q9NRI5 854 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 KRT82Q9NSB4 513 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 EID1Q9Y6B2 187 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 CDK12Q9NYV4 1490 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 LRRIQ1Q96JM4 1722 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 SYCP2Q9BX26 1530 aa5.93□□□□□ -1.46
PDLIM5-218ENST00000513341 CASKIN1Q8WXD9 1431 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 ZC3H13Q5T200 1668 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms