RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
PDPN-210ENST00000513143 ESR2Q92731 530 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 GLIS2Q9BZE0 524 aaPredicted RBP14.81□□□□□ -0.04
PDPN-210ENST00000513143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.81□□□□□ -0.04
PDPN-210ENST00000513143 TOMM22Q9NS69 142 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 ZSWIM5Q9P217 1185 aa14.81□□□□□ -0.04
PDPN-210ENST00000513143 SSC5DA1L4H1 1573 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 RANBP6O60518 1105 aaKnown RBP14.8□□□□□ -0.04
PDPN-210ENST00000513143 KDM4AO75164 1064 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 EXOSC10Q01780 885 aaKnown RBP14.8□□□□□ -0.04
PDPN-210ENST00000513143 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 CYB5R4Q7L1T6 521 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 DHX32Q7L7V1 743 aaKnown RBP14.8□□□□□ -0.04
PDPN-210ENST00000513143 IL27Q8NEV9 243 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 CDCA5Q96FF9 252 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
PDPN-210ENST00000513143 TSHZ2Q9NRE2 1034 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
PDPN-210ENST00000513143 GREB1LQ9C091 1923 aaPredicted RBP14.79□□□□□ -0.04
PDPN-210ENST00000513143 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 KIF3CO14782 793 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 CPA1P15085 419 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 RPS6KB1P23443 525 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 MCM5P33992 734 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 TFAP4Q01664 338 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 CCDC17Q96LX7 622 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
PDPN-210ENST00000513143 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 YY1P25490 414 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 NEK4P51957 841 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 ANTXR2P58335 489 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
PDPN-210ENST00000513143 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
PDPN-210ENST00000513143 FAM47AQ5JRC9 791 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 MTA3Q9BTC8 594 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 ZNF341Q9BYN7 854 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 ZNF112Q9UJU3 913 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 PLIN4Q96Q06 1357 aa14.78□□□□□ -0.04
PDPN-210ENST00000513143 PRC1O43663 620 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 TSPY3P0CV98 308 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 TSPY8P0CW00 308 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 AKR1B1P15121 316 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 NF2P35240 595 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 CHST3Q7LGC8 479 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 IQCA1Q86XH1 822 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 FBXL16Q8N461 479 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 TMEM87BQ96K49 555 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 TTC14Q96N46 770 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 ALDH8A1Q9H2A2 487 aaPredicted RBP14.77□□□□□ -0.04
PDPN-210ENST00000513143 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.04
PDPN-210ENST00000513143 TRPM7Q96QT4 1865 aa14.77□□□□□ -0.05
PDPN-210ENST00000513143 TRAF5O00463 557 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 USP2O75604 605 aaPredicted RBP14.76□□□□□ -0.05
PDPN-210ENST00000513143 CAP2P40123 477 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 IGDCC4Q8TDY8 1250 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 KLRG1Q96E93 195 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 TCEANC2Q96MN5 208 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDPN-210ENST00000513143 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 IL17RBQ9NRM6 502 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 PAPPA2Q9BXP8 1791 aa14.76□□□□□ -0.05
PDPN-210ENST00000513143 IGKV6D-41A0A0C4DH26 115 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 PPP1R12BO60237 982 aaPredicted RBP14.75□□□□□ -0.05
PDPN-210ENST00000513143 CTNND1O60716 968 aaKnown RBP14.75□□□□□ -0.05
PDPN-210ENST00000513143 ITGBL1O95965 494 aaPredicted RBP14.75□□□□□ -0.05
PDPN-210ENST00000513143 ABCB5Q2M3G0 1257 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 CCDC178Q5BJE1 867 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 ZNF784Q8NCA9 323 aaPredicted RBP14.75□□□□□ -0.05
PDPN-210ENST00000513143 ZSCAN10Q96SZ4 725 aaPredicted RBP14.75□□□□□ -0.05
PDPN-210ENST00000513143 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 UBAC1Q9BSL1 405 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 DOCK1Q14185 1865 aa14.75□□□□□ -0.05
PDPN-210ENST00000513143 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
PDPN-210ENST00000513143 IFIT3O14879 490 aaKnown RBP14.74□□□□□ -0.05
PDPN-210ENST00000513143 ST18O60284 1047 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 NMT2O60551 498 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 GDF11O95390 407 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 GUCY1A2P33402 732 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 NOVP48745 357 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 JAG1P78504 1218 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 FMR1Q06787 632 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDPN-210ENST00000513143 SART3Q15020 963 aaKnown RBP14.74□□□□□ -0.05
PDPN-210ENST00000513143 SEC23AQ15436 765 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 SHROOM1Q2M3G4 852 aaPredicted RBP14.74□□□□□ -0.05
PDPN-210ENST00000513143 Q6ZUG5 572 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDPN-210ENST00000513143 WRNIP1Q96S55 665 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 LRRC2Q9BYS8 371 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 CABP5Q9NP86 173 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 FZD1Q9UP38 647 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 OTOFQ9HC10 1997 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 TNKSO95271 1327 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms