RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 DENND2AQ9ULE3 1009 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 MGEA5O60502 916 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 NEDD9Q14511 834 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 ZNF804AQ7Z570 1209 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 hCG_1642624A0A1W2PR95 340 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 IDEP14735 1019 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 PDE6AP16499 860 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 ANO1Q5XXA6 986 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 VPS36Q86VN1 386 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 AATFQ9NY61 560 aaKnown RBP eCLIP12.17□□□□□ -0.46
CPNE4-209ENST00000512055 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TTC6Q86TZ1 520 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TTC14Q96N46 770 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.17□□□□□ -0.46
CPNE4-209ENST00000512055 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TMEM131LA2VDJ0 1609 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 GYG1P46976 350 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 KANK3Q6NY19 840 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SMIM23A6NLE4 172 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 YEATS4O95619 227 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SIK1P57059 783 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 TSNARE1Q96NA8 513 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 GBP5Q96PP8 586 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CTAGE15A4D2H0 777 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CTAGE8P0CG41 777 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SCRN1Q12765 414 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CTAGE4Q8IX94 777 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 RTL9Q8NET4 1388 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 PDE8BO95263 885 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 MTX1Q13505 466 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CBX8Q9HC52 389 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 IFNKQ9P0W0 207 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 DNAI1Q9UI46 699 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 USH1CQ9Y6N9 552 aa12.16□□□□□ -0.46
CPNE4-209ENST00000512055 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-209ENST00000512055 CETN3O15182 167 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 SMIM24O75264 130 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 KRT40Q6A162 431 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-209ENST00000512055 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 KCNJ14Q9UNX9 436 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 MAST3O60307 1309 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 MCM7P33993 719 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
CPNE4-209ENST00000512055 STX17P56962 302 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 ATL3Q6DD88 541 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 DIS3L2Q8IYB7 885 aaKnown RBP12.15□□□□□ -0.46
CPNE4-209ENST00000512055 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 USP28Q96RU2 1077 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 TXNDC9O14530 226 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 KRT2P35908 639 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
CPNE4-209ENST00000512055 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-209ENST00000512055 M0R2C6 588 aa12.15□□□□□ -0.47
CPNE4-209ENST00000512055 PFKFB2O60825 505 aa12.15□□□□□ -0.47
CPNE4-209ENST00000512055 NR1I2O75469 434 aa12.15□□□□□ -0.47
CPNE4-209ENST00000512055 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.47
CPNE4-209ENST00000512055 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.47
CPNE4-209ENST00000512055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.47
CPNE4-209ENST00000512055 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 ZNF174Q15697 407 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 H7C1W4 665 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 PPFIA2O75334 1257 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CALM1P0DP23 149 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CALM2P0DP24 149 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CALM3P0DP25 149 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 ARL1P40616 181 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 PSMD6Q15008 389 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 NUF2Q9BZD4 464 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 RAB34Q9BZG1 259 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CIAO1O76071 339 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 NAPAP54920 295 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CEP85LQ5SZL2 805 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms