RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TRMT44Q8IYL2 757 aaKnown RBP20.17■□□□□ 0.82
NUP54-205ENST00000507257 ZNF594Q96JF6 807 aaPredicted RBP20.17■□□□□ 0.82
NUP54-205ENST00000507257 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 ZAP70P43403 619 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 UBE3CQ15386 1083 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
NUP54-205ENST00000507257 YY1AP1Q9H869 796 aa20.17■□□□□ 0.82
NUP54-205ENST00000507257 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 TEX33O43247 280 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 MCM3P25205 808 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 ADORA1P30542 326 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 HSP90AA4PQ58FG1 418 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
NUP54-205ENST00000507257 SH3RF1Q7Z6J0 888 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 MICU3Q86XE3 530 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 SLC35F6Q8N357 371 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 PUS3Q9BZE2 481 aaKnown RBP20.16■□□□□ 0.82
NUP54-205ENST00000507257 CHD4Q14839 1912 aa20.16■□□□□ 0.82
NUP54-205ENST00000507257 RCAN1P53805 252 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 VSNL1P62760 191 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 TRIM14Q14142 442 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 SCARF1Q14162 830 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
NUP54-205ENST00000507257 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 SYNRGQ9UMZ2 1314 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 AMPD2Q01433 879 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
NUP54-205ENST00000507257 AATFQ9NY61 560 aaKnown RBP eCLIP20.15■□□□□ 0.82
NUP54-205ENST00000507257 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
NUP54-205ENST00000507257 PLA2G12BQ9BX93 195 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
NUP54-205ENST00000507257 ALS2Q96Q42 1657 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 COL18A1P39060 1754 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 LRRC10BA6NIK2 292 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 BTBD18B2RXH4 712 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 GYPCP04921 128 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 ARHGAP25P42331 645 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 CORO7P57737 925 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 GRIN1Q05586 938 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 GSDMAQ96QA5 445 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 SLC26A6Q9BXS9 759 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.81
NUP54-205ENST00000507257 N4BP1O75113 896 aaKnown RBP20.13■□□□□ 0.81
NUP54-205ENST00000507257 TMEM67Q5HYA8 995 aa20.13■□□□□ 0.81
NUP54-205ENST00000507257 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
NUP54-205ENST00000507257 B4E1Z4 1266 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 CPP00450 1065 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 RXRAP19793 462 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 MAP9Q49MG5 647 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 SPECC1Q5M775 1068 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 LRRC31Q6UY01 552 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 CYP26C1Q6V0L0 522 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 NFXL1Q6ZNB6 911 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 TRIM22Q8IYM9 498 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 PPM1EQ8WY54 764 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 LIMA1Q9UHB6 759 aaKnown RBP20.12■□□□□ 0.81
NUP54-205ENST00000507257 MYO6Q9UM54 1294 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 EIF3CLB5ME19 914 aaKnown RBP20.12■□□□□ 0.81
NUP54-205ENST00000507257 CYP27B1O15528 508 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 PPFIA4O75335 1185 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 DEXIO95424 95 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 CASP14P31944 242 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 CABP4P57796 275 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 NKX2-3Q8TAU0 364 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 RPGRIP1Q96KN7 1286 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 EIF3CQ99613 913 aaKnown RBP20.12■□□□□ 0.81
NUP54-205ENST00000507257 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 SENP2Q9HC62 589 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 DENND2AQ9ULE3 1009 aa20.12■□□□□ 0.81
NUP54-205ENST00000507257 MYH8P13535 1937 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 RIC1Q4ADV7 1423 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 TARSL2A2RTX5 802 aaKnown RBP20.11■□□□□ 0.81
NUP54-205ENST00000507257 SPAG1Q07617 926 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
NUP54-205ENST00000507257 ICE2Q659A1 982 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 ZNF662Q6ZS27 426 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 SUGCTQ9HAC7 445 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 SEC31BQ9NQW1 1179 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 PAPPAQ13219 1627 aa20.11■□□□□ 0.81
NUP54-205ENST00000507257 A0A0U1RQJ8 604 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 BMP15O95972 392 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 RHOXF2BP0C7M4 288 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 FXR1P51114 621 aaKnown RBP eCLIP20.1■□□□□ 0.81
NUP54-205ENST00000507257 TTC31Q49AM3 519 aaPredicted RBP20.1■□□□□ 0.81
NUP54-205ENST00000507257 ATRIPQ8WXE1 791 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 RHOXF2Q9BQY4 288 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 FAM107BQ9H098 131 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 ABHD10Q9NUJ1 306 aa20.1■□□□□ 0.81
NUP54-205ENST00000507257 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms