RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SHMT1P34896 483 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 CDK8P49336 464 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 GABPAQ06546 454 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 FSTL1Q12841 308 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 SBK1Q52WX2 424 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 RRP12Q5JTH9 1297 aaKnown RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 GIMAP6Q6P9H5 292 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 CLEC10AQ8IUN9 316 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 WRNIP1Q96S55 665 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 DHX36Q9H2U1 1008 aaKnown RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 SERPINB13Q9UIV8 391 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 PPP2R3BQ9Y5P8 575 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 NF2P35240 595 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 STOX1Q6ZVD7 989 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 KLRG1Q96E93 195 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 USP26Q9BXU7 913 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 TOMM22Q9NS69 142 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 ARPP21Q9UBL0 812 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 PCNTO95613 3336 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 SIPA1L1O43166 1804 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 ZNF213O14771 459 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 SLC27A2O14975 620 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 PPP1R12BO60237 982 aaPredicted RBP10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 AKR1B1P15121 316 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 HUNKP57058 714 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 GRM1Q13255 1194 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 NECTIN1Q15223 517 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 CREB3L3Q68CJ9 461 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 C2orf69Q8N8R5 385 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 ELP3Q9H9T3 547 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 ABT1Q9ULW3 272 aaKnown RBP10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 FOCADQ5VW36 1801 aa10.5□□□□□ -0.73
SCAMP1-202ENST00000506858 MPHOSPH10O00566 681 aaKnown RBP10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 RASA1P20936 1047 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 VGLL4Q14135 290 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 DCAF15Q66K64 600 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 CHST3Q7LGC8 479 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 MKNK2Q9HBH9 465 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 NEDD4P46934 1319 aa10.49□□□□□ -0.73
SCAMP1-202ENST00000506858 TMEM88BA6NKF7 163 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 B4E1Z4 1266 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 TBC1D12O60347 775 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 RANBP6O60518 1105 aaKnown RBP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 NMT2O60551 498 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 GH2P01242 217 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 CPA1P15085 419 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 C1QTNF8P60827 252 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 IMMTQ16891 758 aaKnown RBP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 CERKLQ49MI3 558 aaPredicted RBP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 TATDN1Q6P1N9 297 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 ARMC9Q7Z3E5 817 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 EHD4Q9H223 541 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 CTNNA3Q9UI47 895 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 ZNF112Q9UJU3 913 aa10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 DDX60LQ5H9U9 1706 aaKnown RBP10.48□□□□□ -0.73
SCAMP1-202ENST00000506858 E7EWF7 191 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 REC8O95072 547 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 GJA5P36382 358 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 CAP2P40123 477 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 IREB2P48200 963 aaKnown RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 APLP1P51693 650 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 TFAP4Q01664 338 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 DGKZQ13574 1117 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 SEPT2Q15019 361 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ADCK5Q3MIX3 580 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 AKNAD1Q5T1N1 836 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 LDLRAD1Q5T700 205 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 MFSD6Q6ZSS7 791 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 PAXIP1Q6ZW49 1069 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 SAPCD2Q86UD0 394 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 TCEANC2Q96MN5 208 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 BACH2Q9BYV9 841 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 HERC5Q9UII4 1024 aaKnown RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ANAPC4Q9UJX5 808 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 SNCAIPQ9Y6H5 919 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 COL2A1P02458 1487 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
SCAMP1-202ENST00000506858 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms