RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 AS3MTQ9HBK9 375 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 ZBTB21Q9ULJ3 1066 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 CHGBP05060 677 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 ATP5JP18859 108 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 MTMR2Q13614 643 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 PRPF38BQ5VTL8 546 aaKnown RBP17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 EMILIN3Q9NT22 766 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 GINM1Q9NU53 330 aa17.48■□□□□ 0.39
CDC42SE2-209ENST00000506419 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 PEX10O60683 326 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 GH2P01242 217 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 FLT3LGP49771 235 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 PNMA3Q9UL41 463 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 DOCK1Q14185 1865 aa17.47■□□□□ 0.39
CDC42SE2-209ENST00000506419 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 HOXA7P31268 230 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 SHMT1P34896 483 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 POTEEQ6S8J3 1075 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 LCORLQ8N3X6 602 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 HAUS7Q99871 368 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 EHD4Q9H223 541 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 PAG1Q9NWQ8 432 aa17.46■□□□□ 0.39
CDC42SE2-209ENST00000506419 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 PRKAB2O43741 272 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 GUCY1A2P33402 732 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 GCLCP48506 637 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 GABPAQ06546 454 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 GJD2Q9UKL4 321 aa17.45■□□□□ 0.38
CDC42SE2-209ENST00000506419 ADCY3O60266 1144 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 CYP2D6P10635 497 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 CCL5P13501 91 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 ELNP15502 786 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 ADD2P35612 726 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 Q3C1V9 767 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 TXNRD2Q9NNW7 524 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 BIN2Q9UBW5 565 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE2-209ENST00000506419 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 PTPRFP10586 1907 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 SMIM22K7EJ46 135 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 IRF5Q13568 498 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 SLAIN1Q8ND83 568 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 CRNKL1Q9BZJ0 848 aaKnown RBP17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 UNC93B1Q9H1C4 597 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 DCP1AQ9NPI6 582 aaPredicted RBP17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 MCM9Q9NXL9 1143 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 MORF4L1Q9UBU8 362 aa17.43■□□□□ 0.38
CDC42SE2-209ENST00000506419 GJB1P08034 283 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 HERVK_113P62684 666 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 PXYLP1Q8TE99 480 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 COA7Q96BR5 231 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 RNF208Q9H0X6 261 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
CDC42SE2-209ENST00000506419 CDK5RAP2Q96SN8 1893 aa17.41■□□□□ 0.38
CDC42SE2-209ENST00000506419 GJA8P48165 433 aa17.41■□□□□ 0.38
CDC42SE2-209ENST00000506419 UBXN2AP68543 259 aa17.41■□□□□ 0.38
CDC42SE2-209ENST00000506419 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE2-209ENST00000506419 MBD4O95243 580 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 INHAP05111 366 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 SEPT2Q15019 361 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 SLC44A5Q8NCS7 719 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 DYNLL2Q96FJ2 89 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
CDC42SE2-209ENST00000506419 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 SLC34A2O95436 690 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 CATSPERGQ6ZRH7 1159 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 PUS7LQ9H0K6 701 aaKnown RBP17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
CDC42SE2-209ENST00000506419 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms