RNA–Protein interactions for RNA: ENST00000506372.5

CDH18-205, Transcript of cadherin 18, humanhuman

TSL 1 (best) BASIC

Gene CDH18, Length 2,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-205ENST00000506372 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 LEO1Q8WVC0 666 aaPredicted RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 AIFM3Q96NN9 605 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 IL17RBQ9NRM6 502 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 GJB4Q9NTQ9 266 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 SAP30BPQ9UHR5 308 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 GOLGB1Q14789 3259 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 TULP1O00294 542 aaPredicted RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 DDAH1O94760 285 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 CALM1P0DP23 149 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 CALM2P0DP24 149 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 CALM3P0DP25 149 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 RASA1P20936 1047 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 HDLBPQ00341 1268 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 TFAP4Q01664 338 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 SSRP1Q08945 709 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 SLC4A8Q2Y0W8 1093 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 CATIPQ7Z7H3 387 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 KLHL34Q8N239 644 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 TEKT1Q969V4 418 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 ZDHHC15Q96MV8 337 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 PSMD1Q99460 953 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 ALG1Q9BT22 464 aa8.24□□□□□ -1.09
CDH18-205ENST00000506372 BRCA1P38398 1863 aaKnown RBP8.24□□□□□ -1.09
CDH18-205ENST00000506372 YDJCA8MPS7 323 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 UBE2Q2LH0YL09 131 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 CDK8P49336 464 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 SCNN1DP51172 638 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 KIF23Q02241 960 aaPredicted RBP8.23□□□□□ -1.09
CDH18-205ENST00000506372 GABPAQ06546 454 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 CCDC93Q567U6 631 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 CDC42EP5Q6NZY7 148 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 RTKN2Q8IZC4 609 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 NUP133Q8WUM0 1156 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 DDX4Q9NQI0 724 aaKnown RBP8.23□□□□□ -1.09
CDH18-205ENST00000506372 RCOR1Q9UKL0 485 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 CFAP45Q9UL16 551 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 GOLGA6L3A6NEY3 463 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 GUCY1A2P33402 732 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 CRKP46108 304 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 TGFB2P61812 414 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 KRT40Q6A162 431 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 SPATA32Q96LK8 384 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 SLC26A6Q9BXS9 759 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 RNF26Q9BY78 433 aaPredicted RBP8.23□□□□□ -1.09
CDH18-205ENST00000506372 MTFR1LQ9H019 292 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 ZNF287Q9HBT7 754 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
CDH18-205ENST00000506372 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
CDH18-205ENST00000506372 COL4A5P29400 1685 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 KIF28PB7ZC32 967 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 PPIP5K2O43314 1243 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 ZBTB7AO95365 584 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 NOVP48745 357 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 BRAPQ7Z569 592 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 TRIM22Q8IYM9 498 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 CMTR1Q8N1G2 835 aaKnown RBP8.22□□□□□ -1.09
CDH18-205ENST00000506372 WASF1Q92558 559 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 USP28Q96RU2 1077 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 MAP3K14Q99558 947 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 VPS33BQ9H267 617 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 MYH8P13535 1937 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 DEXIO95424 95 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 U2AF2P26368 475 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDH18-205ENST00000506372 TMTC3Q6ZXV5 915 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 ZNF444Q8N0Y2 327 aaPredicted RBP8.22□□□□□ -1.09
CDH18-205ENST00000506372 NEDD1Q8NHV4 660 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 PGBD1Q96JS3 809 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 ZNF396Q96N95 335 aaPredicted RBP8.22□□□□□ -1.09
CDH18-205ENST00000506372 OSBPL5Q9H0X9 879 aaPredicted RBP8.22□□□□□ -1.09
CDH18-205ENST00000506372 RTEL1Q9NZ71 1219 aa8.22□□□□□ -1.09
CDH18-205ENST00000506372 PLIN4Q96Q06 1357 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 SIPA1L1O43166 1804 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 PRPF3O43395 683 aaKnown RBP8.21□□□□□ -1.09
CDH18-205ENST00000506372 NPM3O75607 178 aaKnown RBP8.21□□□□□ -1.09
CDH18-205ENST00000506372 PLEKHA8P1O95397 391 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 TSPY3P0CV98 308 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 TSPY8P0CW00 308 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 PKN1Q16512 942 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 L1TD1Q5T7N2 865 aaKnown RBP8.21□□□□□ -1.09
CDH18-205ENST00000506372 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 SYAP1Q96A49 352 aaPredicted RBP8.21□□□□□ -1.09
CDH18-205ENST00000506372 SGIP1Q9BQI5 828 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 FTOQ9C0B1 505 aaKnown RBP eCLIP8.21□□□□□ -1.09
CDH18-205ENST00000506372 FER1L6Q2WGJ9 1857 aa8.21□□□□□ -1.09
CDH18-205ENST00000506372 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.1
CDH18-205ENST00000506372 XRCC6P12956 609 aaKnown RBP eCLIP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms