RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
SGCA-205ENST00000505964 FLT1P17948 1338 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
SGCA-205ENST00000505964 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
SGCA-205ENST00000505964 MCM2P49736 904 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 NEK4P51957 841 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
SGCA-205ENST00000505964 HAND2P61296 217 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 BECN1Q14457 450 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 DLGAP5Q15398 846 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 STOX1Q6ZVD7 989 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
SGCA-205ENST00000505964 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 SLC10A4Q96EP9 437 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 NBPF3Q9H094 633 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 ALDH8A1Q9H2A2 487 aaPredicted RBP13.41□□□□□ -0.26
SGCA-205ENST00000505964 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
SGCA-205ENST00000505964 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 ROBO3Q96MS0 1386 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SGCA-205ENST00000505964 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
SGCA-205ENST00000505964 MINDY4BA8MYZ0 360 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 USP17L21D6R901 530 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 WDHD1O75717 1129 aaPredicted RBP13.4□□□□□ -0.26
SGCA-205ENST00000505964 ALDH1A1P00352 501 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
SGCA-205ENST00000505964 FGRP09769 529 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 CAP1Q01518 475 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 TRDNQ13061 729 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 C12orf60Q5U649 245 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 MAPKAPK5Q8IW41 473 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 NCOA7Q8NI08 942 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
SGCA-205ENST00000505964 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
SGCA-205ENST00000505964 TTC14Q96N46 770 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 CNNM2Q9H8M5 875 aa13.4□□□□□ -0.26
SGCA-205ENST00000505964 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 SIPA1L1O43166 1804 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
SGCA-205ENST00000505964 ENTPD3O75355 529 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 RPS6KB1P23443 525 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SGCA-205ENST00000505964 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
SGCA-205ENST00000505964 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
SGCA-205ENST00000505964 KRT23Q9C075 422 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
SGCA-205ENST00000505964 MYO1BO43795 1136 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 CRHR2Q13324 411 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 ANKRD1Q15327 319 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
SGCA-205ENST00000505964 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
SGCA-205ENST00000505964 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
SGCA-205ENST00000505964 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
SGCA-205ENST00000505964 PDRG1Q9NUG6 133 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
SGCA-205ENST00000505964 ORC4O43929 436 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 MYCP01106 439 aaPredicted RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 MCM5P33992 734 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 GJA5P36382 358 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 EXOSC10Q01780 885 aaKnown RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 CTDSPL2Q05D32 466 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 PDE4BQ07343 736 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 ZNF287Q9HBT7 754 aa13.37□□□□□ -0.27
SGCA-205ENST00000505964 DDX4Q9NQI0 724 aaKnown RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
SGCA-205ENST00000505964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
SGCA-205ENST00000505964 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
SGCA-205ENST00000505964 CLRN2A0PK11 232 aa13.36□□□□□ -0.27
SGCA-205ENST00000505964 K7ELQ4 463 aaPredicted RBP13.36□□□□□ -0.27
SGCA-205ENST00000505964 CYP2D6P10635 497 aa13.36□□□□□ -0.27
SGCA-205ENST00000505964 NFIAQ12857 509 aa13.36□□□□□ -0.27
SGCA-205ENST00000505964 PICALMQ13492 652 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms