RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
DDX41-204ENST00000504807 PRRT2Q7Z6L0 340 aaPredicted RBP16.11■□□□□ 0.17
DDX41-204ENST00000504807 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
DDX41-204ENST00000504807 TEX11Q8IYF3 940 aa16.11■□□□□ 0.17
DDX41-204ENST00000504807 MAFAQ8NHW3 353 aaPredicted RBP16.11■□□□□ 0.17
DDX41-204ENST00000504807 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
DDX41-204ENST00000504807 ALPK3Q96L96 1907 aa16.11■□□□□ 0.17
DDX41-204ENST00000504807 CAPN2P17655 700 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 PLA2G5P39877 138 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 GSTO1P78417 241 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 FAM109BQ6ICB4 259 aaPredicted RBP16.1■□□□□ 0.17
DDX41-204ENST00000504807 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
DDX41-204ENST00000504807 MAPKAPK5Q8IW41 473 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
DDX41-204ENST00000504807 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 TBC1D12O60347 775 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 LDHCP07864 332 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 BCRP11274 1271 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 AACSQ86V21 672 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 TGFBRAP1Q8WUH2 860 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 FLT1P17948 1338 aa16.09■□□□□ 0.17
DDX41-204ENST00000504807 APBB1O00213 710 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 CXCL11O14625 94 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 CTNND1O60716 968 aaKnown RBP16.08■□□□□ 0.16
DDX41-204ENST00000504807 PPP4CP60510 307 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
DDX41-204ENST00000504807 EVX2Q03828 476 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 ZNF697Q5TEC3 545 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 RHPN1Q8TCX5 695 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
DDX41-204ENST00000504807 FAM122AQ96E09 287 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 PARK7Q99497 189 aaKnown RBP16.08■□□□□ 0.16
DDX41-204ENST00000504807 CDX2Q99626 313 aaPredicted RBP16.08■□□□□ 0.16
DDX41-204ENST00000504807 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX41-204ENST00000504807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX41-204ENST00000504807 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
DDX41-204ENST00000504807 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
DDX41-204ENST00000504807 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
DDX41-204ENST00000504807 SAP30BPQ9UHR5 308 aaKnown RBP16.07■□□□□ 0.16
DDX41-204ENST00000504807 PALD1Q9ULE6 856 aa16.07■□□□□ 0.16
DDX41-204ENST00000504807 LOC285556D6RIA3 1793 aa16.07■□□□□ 0.16
DDX41-204ENST00000504807 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
DDX41-204ENST00000504807 TNPO2O14787 897 aaKnown RBP16.06■□□□□ 0.16
DDX41-204ENST00000504807 CHGBP05060 677 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 CYP7A1P22680 504 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 CAP2P40123 477 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
DDX41-204ENST00000504807 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
DDX41-204ENST00000504807 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
DDX41-204ENST00000504807 IRF5Q13568 498 aa16.05■□□□□ 0.16
DDX41-204ENST00000504807 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
DDX41-204ENST00000504807 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
DDX41-204ENST00000504807 TMEM265A0A087WTH1 108 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 PEX10O60683 326 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 SPP2Q13103 211 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
DDX41-204ENST00000504807 GDF11O95390 407 aa16.03■□□□□ 0.16
DDX41-204ENST00000504807 RPAP2Q8IXW5 612 aaPredicted RBP16.03■□□□□ 0.16
DDX41-204ENST00000504807 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
DDX41-204ENST00000504807 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
DDX41-204ENST00000504807 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
DDX41-204ENST00000504807 CDH23Q9H251 3354 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 MGAMO43451 1857 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 BAG3O95817 575 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 HMGCS2P54868 508 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 POTEEQ6S8J3 1075 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.16
DDX41-204ENST00000504807 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 PI4KBQ9UBF8 816 aa16.02■□□□□ 0.16
DDX41-204ENST00000504807 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
DDX41-204ENST00000504807 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
DDX41-204ENST00000504807 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
DDX41-204ENST00000504807 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
DDX41-204ENST00000504807 SLC45A1Q9Y2W3 748 aa16.01■□□□□ 0.15
DDX41-204ENST00000504807 PFASO15067 1338 aa16■□□□□ 0.15
DDX41-204ENST00000504807 USP17L5A8MUK1 530 aa16■□□□□ 0.15
DDX41-204ENST00000504807 SMIM22K7EJ46 135 aa16■□□□□ 0.15
DDX41-204ENST00000504807 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
DDX41-204ENST00000504807 PDE6AP16499 860 aa16■□□□□ 0.15
DDX41-204ENST00000504807 PLCG2P16885 1265 aa16■□□□□ 0.15
DDX41-204ENST00000504807 TRIM32Q13049 653 aa16■□□□□ 0.15
DDX41-204ENST00000504807 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
DDX41-204ENST00000504807 NOL10Q9BSC4 688 aaKnown RBP16■□□□□ 0.15
DDX41-204ENST00000504807 DHX36Q9H2U1 1008 aaKnown RBP16■□□□□ 0.15
DDX41-204ENST00000504807 SEMA6BQ9H3T3 888 aa16■□□□□ 0.15
DDX41-204ENST00000504807 MYH1P12882 1939 aa16■□□□□ 0.15
DDX41-204ENST00000504807 GOLIM4O00461 696 aa15.99■□□□□ 0.15
DDX41-204ENST00000504807 FOSL2P15408 326 aa15.99■□□□□ 0.15
DDX41-204ENST00000504807 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
DDX41-204ENST00000504807 PLCD1P51178 756 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms