RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MMP14P50281 582 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 RBM5P52756 815 aaKnown RBP eCLIP12.24□□□□□ -0.45
TPM3-217ENST00000504663 PKP1Q13835 747 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 DLGAP5Q15398 846 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 FAM47AQ5JRC9 791 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 RRP12Q5JTH9 1297 aaKnown RBP12.24□□□□□ -0.45
TPM3-217ENST00000504663 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
TPM3-217ENST00000504663 SMARCC2Q8TAQ2 1214 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 ESR2Q92731 530 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 WDR90Q96KV7 1748 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
TPM3-217ENST00000504663 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
TPM3-217ENST00000504663 KLF18A0A0U1RQI7 1052 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 NT5C2P49902 561 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 SHROOM1Q2M3G4 852 aaPredicted RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 GPC2Q8N158 579 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
TPM3-217ENST00000504663 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 GJA3Q9Y6H8 435 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
TPM3-217ENST00000504663 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
TPM3-217ENST00000504663 JAK2O60674 1132 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 AKR1B1P15121 316 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 PDE4BQ07343 736 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 TCP10Q12799 353 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 STK3Q13188 491 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 SAMD7Q7Z3H4 446 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 TEPSINQ96N21 525 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 NCOA5Q9HCD5 579 aaKnown RBP12.22□□□□□ -0.45
TPM3-217ENST00000504663 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
TPM3-217ENST00000504663 SERPINB13Q9UIV8 391 aa12.22□□□□□ -0.45
TPM3-217ENST00000504663 MYH15Q9Y2K3 1946 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 SCN4AP35499 1836 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 GOLGA8BA8MQT2 603 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 RANBP6O60518 1105 aaKnown RBP12.21□□□□□ -0.45
TPM3-217ENST00000504663 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
TPM3-217ENST00000504663 CDC27P30260 824 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 RCAN1P53805 252 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 HIRAP54198 1017 aaPredicted RBP12.21□□□□□ -0.45
TPM3-217ENST00000504663 JAG1P78504 1218 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 NTRK3Q16288 839 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 TTC6Q86TZ1 520 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 FAM83AQ86UY5 434 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 OGFOD1Q8N543 542 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 FAM151AQ8WW52 585 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
TPM3-217ENST00000504663 TOMM22Q9NS69 142 aa12.21□□□□□ -0.45
TPM3-217ENST00000504663 OTOFQ9HC10 1997 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 ABCB7O75027 752 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 DDNO94850 711 aaPredicted RBP12.2□□□□□ -0.46
TPM3-217ENST00000504663 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
TPM3-217ENST00000504663 RXRAP19793 462 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 GUCY1A2P33402 732 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 EPS15P42566 896 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 TFAP4Q01664 338 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 MAP3K10Q02779 954 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 TROAPQ12815 778 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 WTAPQ15007 396 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
TPM3-217ENST00000504663 TATDN1Q6P1N9 297 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 RASGRP2Q7LDG7 609 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 ZNF654Q8IZM8 581 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
TPM3-217ENST00000504663 TMEM39BQ9GZU3 492 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
TPM3-217ENST00000504663 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
TPM3-217ENST00000504663 POLR2AP24928 1970 aaKnown RBP12.19□□□□□ -0.46
TPM3-217ENST00000504663 MYH6P13533 1939 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
TPM3-217ENST00000504663 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 BRD1O95696 1058 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms