RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PHKBQ93100 1093 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 NOL7Q9UMY1 257 aaKnown RBP11.33□□□□□ -0.6
COL1A1-210ENST00000504289 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
COL1A1-210ENST00000504289 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-210ENST00000504289 CUTAO60888 179 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 POLR3DP05423 398 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-210ENST00000504289 SRGNP10124 158 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 USP5P45974 858 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 FUT2Q10981 343 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 STX1AQ16623 288 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
COL1A1-210ENST00000504289 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-210ENST00000504289 LZTS2Q9BRK4 669 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-210ENST00000504289 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 MCM9Q9NXL9 1143 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
COL1A1-210ENST00000504289 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 APBA3O96018 575 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
COL1A1-210ENST00000504289 CEBPZQ03701 1054 aaKnown RBP11.31□□□□□ -0.6
COL1A1-210ENST00000504289 PTPAQ15257 358 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-210ENST00000504289 OTUD7BQ6GQQ9 843 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
COL1A1-210ENST00000504289 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 EYA3Q99504 573 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 NAT10Q9H0A0 1025 aaKnown RBP11.31□□□□□ -0.6
COL1A1-210ENST00000504289 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 CLIC4Q9Y696 253 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 PARP3Q9Y6F1 533 aa11.31□□□□□ -0.6
COL1A1-210ENST00000504289 SRCAPQ6ZRS2 3230 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 TSPY2A6NKD2 308 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 RXRAP19793 462 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 MSNP26038 577 aaKnown RBP11.3□□□□□ -0.6
COL1A1-210ENST00000504289 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 FOSBP53539 338 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 CAMK4Q16566 473 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 GALNT17Q6IS24 598 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-210ENST00000504289 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-210ENST00000504289 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
COL1A1-210ENST00000504289 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 HPSEQ9Y251 543 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
COL1A1-210ENST00000504289 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF500O60304 480 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ADCY5O95622 1261 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 CALML3P27482 149 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 BTDP43251 543 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF165P49910 485 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 PPP4R3BQ5MIZ7 849 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 MPNDQ8N594 471 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 SH3RF3Q8TEJ3 882 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 AIFM3Q96NN9 605 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 GOLPH3LQ9H4A5 285 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 KAT14Q9H8E8 782 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 HOOK1Q9UJC3 728 aaKnown RBP11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
COL1A1-210ENST00000504289 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF202O95125 648 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 PTPREP23469 700 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 KRT2P35908 639 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 NOVP48745 357 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
COL1A1-210ENST00000504289 TFAP4Q01664 338 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 DHX8Q14562 1220 aaKnown RBP11.28□□□□□ -0.6
COL1A1-210ENST00000504289 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
COL1A1-210ENST00000504289 PKN1Q16512 942 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 ZNF827Q17R98 1081 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms