RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 MYLIPQ8WY64 445 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 CNTNAP4Q9C0A0 1308 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
CRNDE-202ENST00000502066 ZFHX4Q86UP3 3567 aa9.68□□□□□ -0.86
CRNDE-202ENST00000502066 CDK19Q9BWU1 502 aa9.68□□□□□ -0.86
CRNDE-202ENST00000502066 ALG2Q9H553 416 aa9.68□□□□□ -0.86
CRNDE-202ENST00000502066 ZFP64Q9NPA5 681 aa9.68□□□□□ -0.86
CRNDE-202ENST00000502066 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
CRNDE-202ENST00000502066 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 ACAP1Q15027 740 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 NBPF11Q86T75 865 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 RASAL3Q86YV0 1011 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 PIGBQ92521 554 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 BHMTQ93088 406 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 SHISA4Q96DD7 197 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 TSPAN10Q9H1Z9 355 aaPredicted RBP9.67□□□□□ -0.86
CRNDE-202ENST00000502066 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
CRNDE-202ENST00000502066 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
CRNDE-202ENST00000502066 CARMIL3Q8ND23 1372 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 BCORQ6W2J9 1755 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 MCM6Q14566 821 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 SLC9C1Q4G0N8 1177 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
CRNDE-202ENST00000502066 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 USP38Q8NB14 1042 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 ADARB2Q9NS39 739 aaKnown RBP9.66□□□□□ -0.86
CRNDE-202ENST00000502066 PGAP2Q9UHJ9 254 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
CRNDE-202ENST00000502066 LTN1O94822 1766 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
CRNDE-202ENST00000502066 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 FOSL2P15408 326 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 SELPP16109 830 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
CRNDE-202ENST00000502066 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 SOGA3Q5TF21 947 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 NUDT8Q8WV74 236 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 NECAB3Q96P71 396 aaPredicted RBP9.65□□□□□ -0.86
CRNDE-202ENST00000502066 PHACTR1Q9C0D0 580 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 NFAT5O94916 1531 aa9.65□□□□□ -0.86
CRNDE-202ENST00000502066 FAM86C2PA6NEL3 165 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 LILRB5O75023 590 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 FKBP4Q02790 459 aaKnown RBP eCLIP9.64□□□□□ -0.87
CRNDE-202ENST00000502066 UBE2Q1Q7Z7E8 422 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 ASB2Q96Q27 587 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 NRXN2Q9P2S2 1712 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
CRNDE-202ENST00000502066 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-202ENST00000502066 SERPINB2P05120 415 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 ITGB8P26012 769 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 CD99L2Q8TCZ2 262 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 EFCC1Q9HA90 598 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 ASAP1Q9ULH1 1129 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-202ENST00000502066 SPTBN4Q9H254 2564 aa9.63□□□□□ -0.87
CRNDE-202ENST00000502066 TRANK1O15050 2925 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 C9orf172C9J069 976 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 TM4SF4P48230 202 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 CLDN10P78369 228 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 TYRO3Q06418 890 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 ADGRE1Q14246 886 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 PRPF40BQ6NWY9 871 aaKnown RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 KRTAP1-3Q8IUG1 177 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
CRNDE-202ENST00000502066 ATXN2LQ8WWM7 1075 aaKnown RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 LTV1Q96GA3 475 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 COL11A2P13942 1736 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-202ENST00000502066 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
CRNDE-202ENST00000502066 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 ERMP1Q7Z2K6 904 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 JDP2Q8WYK2 163 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 POM121Q96HA1 1249 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 ERO1AQ96HE7 468 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 C11orf16Q9NQ32 467 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 GPRC5DQ9NZD1 345 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 ANKIB1Q9P2G1 1089 aa9.61□□□□□ -0.87
CRNDE-202ENST00000502066 ZMYND8Q9ULU4 1186 aaPredicted RBP9.61□□□□□ -0.87
CRNDE-202ENST00000502066 TCF20Q9UGU0 1960 aaKnown RBP9.61□□□□□ -0.87
CRNDE-202ENST00000502066 ANKRD31Q8N7Z5 1873 aa9.6□□□□□ -0.87
CRNDE-202ENST00000502066 ANKRD26Q9UPS8 1709 aa9.6□□□□□ -0.87
CRNDE-202ENST00000502066 ADGRB1O14514 1584 aa9.6□□□□□ -0.87
CRNDE-202ENST00000502066 HIRAP54198 1017 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms