RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ADH1AP07327 375 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 NR3C2P08235 984 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 ZSCAN22P10073 491 aaPredicted RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 UBE2HP62256 183 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 PTPN12Q05209 780 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 HSP90AB2PQ58FF8 381 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 SOGA3Q5TF21 947 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 ZNF295-AS1Q8N0V1 137 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 R3HCC1Q9Y3T6 440 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 NUP188Q5SRE5 1749 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 UTYO14607 1347 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 UQCRHLA0A096LP55 91 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 OPLAHO14841 1288 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 UQCRHP07919 91 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 RBL2Q08999 1139 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 SYCP1Q15431 976 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 C1orf53Q5VUE5 145 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 RUFY3Q7L099 469 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 VPS37DQ86XT2 251 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 PKNOX2Q96KN3 472 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 FHDC1Q9C0D6 1143 aaPredicted RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 C12orf49Q9H741 205 aa4.66□□□□□ -1.66
CLTC-209ENST00000498711 THRAP3Q9Y2W1 955 aaKnown RBP4.66□□□□□ -1.66
CLTC-209ENST00000498711 SIPA1L3O60292 1781 aaPredicted RBP4.65□□□□□ -1.66
CLTC-209ENST00000498711 LTN1O94822 1766 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 ELP1O95163 1332 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 TLDC2A0PJX2 215 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 GIPC1O14908 333 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 CTIFO43310 598 aaKnown RBP4.65□□□□□ -1.66
CLTC-209ENST00000498711 HMGB2P26583 209 aaKnown RBP4.65□□□□□ -1.66
CLTC-209ENST00000498711 ST3GAL1Q11201 340 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 VPS53Q5VIR6 699 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 IL17REQ8NFR9 667 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 CHAMP1Q96JM3 812 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 ZSCAN31Q96LW9 406 aaPredicted RBP4.65□□□□□ -1.66
CLTC-209ENST00000498711 HYPKQ9NX55 129 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 PARP3Q9Y6F1 533 aa4.65□□□□□ -1.66
CLTC-209ENST00000498711 F6X3S4 739 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 SIAH2O43255 324 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 F13A1P00488 732 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 CENPCQ03188 943 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 KIAA2012Q0VF49 1180 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 NOLC1Q14978 699 aaKnown RBP eCLIP4.65□□□□□ -1.677e-7■□□□□ 11.2
CLTC-209ENST00000498711 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.65□□□□□ -1.67
CLTC-209ENST00000498711 BEND3Q5T5X7 828 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 KRT28Q7Z3Y7 464 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 ANKRD7Q92527 254 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 NIFKQ9BYG3 293 aaKnown RBP4.65□□□□□ -1.67
CLTC-209ENST00000498711 SRA1Q9HD15 236 aaKnown RBP4.65□□□□□ -1.67
CLTC-209ENST00000498711 KCND1Q9NSA2 647 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 TSPYL4Q9UJ04 414 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 GGT7Q9UJ14 662 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 LIMCH1Q9UPQ0 1083 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 MTMR6Q9Y217 621 aa4.65□□□□□ -1.67
CLTC-209ENST00000498711 SBF2Q86WG5 1849 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 AP5Z1O43299 807 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 NECTIN1Q15223 517 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 TAF7Q15545 349 aaPredicted RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 HIF1AQ16665 826 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 MCF2L2Q86YR7 1114 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 RHPN1Q8TCX5 695 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 NLRP3Q96P20 1036 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 CCDC94Q9BW85 323 aaPredicted RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 SH2B1Q9NRF2 756 aaPredicted RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 COL5A2P05997 1499 aaPredicted RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 COL15A1P39059 1388 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 PKD1L3Q7Z443 1732 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 A6NHS1 94 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 GNAT3A8MTJ3 354 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 STX6O43752 255 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 SYT1P21579 422 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 TICAM2Q86XR7 235 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 DHX37Q8IY37 1157 aaKnown RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 KIF1BPQ96EK5 621 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 ZSWIM4Q9H7M6 989 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 EXOC6BQ9Y2D4 811 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 LRRFIP2Q9Y608 721 aaKnown RBP4.64□□□□□ -1.67
CLTC-209ENST00000498711 PAPPAQ13219 1627 aa4.64□□□□□ -1.67
CLTC-209ENST00000498711 STK10O94804 968 aaKnown RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 FGRP09769 529 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 GTF2E1P29083 439 aaPredicted RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 GJA8P48165 433 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 ST13P50502 369 aaKnown RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 AK2P54819 239 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 TAF1CQ15572 869 aaPredicted RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 HSP90AB4PQ58FF6 505 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 PPP1R18Q6NYC8 613 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 ZSCAN10Q96SZ4 725 aaPredicted RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 KCNF1Q9H3M0 494 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 FAM8A1Q9UBU6 413 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 CASZ1Q86V15 1759 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 MEN1O00255 615 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 ADCY5O95622 1261 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 HOXC9P31274 260 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 EIF4A1P60842 406 aaKnown RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 KCNC4Q03721 635 aa4.63□□□□□ -1.67
CLTC-209ENST00000498711 TMEM214Q6NUQ4 689 aaKnown RBP4.63□□□□□ -1.67
CLTC-209ENST00000498711 KDF1Q8NAX2 398 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms