RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
HPS1-213ENST00000497527 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
HPS1-213ENST00000497527 GPHNQ9NQX3 736 aaPredicted RBP14.24□□□□□ -0.13
HPS1-213ENST00000497527 ATRNL1Q5VV63 1379 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 SIPA1L1O43166 1804 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 SYT1P21579 422 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 TFAP4Q01664 338 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 CLEC17AQ6ZS10 378 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 ARHGAP27Q6ZUM4 889 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 MICU3Q86XE3 530 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
HPS1-213ENST00000497527 ZNF654Q8IZM8 581 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
HPS1-213ENST00000497527 NSUN7Q8NE18 718 aaKnown RBP14.23□□□□□ -0.13
HPS1-213ENST00000497527 ANKS1AQ92625 1134 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 DYNLL2Q96FJ2 89 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 TRIM34Q9BYJ4 488 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 DDX4Q9NQI0 724 aaKnown RBP14.23□□□□□ -0.13
HPS1-213ENST00000497527 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
HPS1-213ENST00000497527 PI4KBQ9UBF8 816 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
HPS1-213ENST00000497527 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 GREB1LQ9C091 1923 aaPredicted RBP14.22□□□□□ -0.13
HPS1-213ENST00000497527 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 RASA1P20936 1047 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 TNNI2P48788 182 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 GABPAQ06546 454 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 RTN1Q16799 776 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 SLC4A8Q2Y0W8 1093 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
HPS1-213ENST00000497527 NEDD1Q8NHV4 660 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 PRMT6Q96LA8 375 aaPredicted RBP14.22□□□□□ -0.13
HPS1-213ENST00000497527 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
HPS1-213ENST00000497527 TDRD3Q9H7E2 651 aaKnown RBP14.22□□□□□ -0.13
HPS1-213ENST00000497527 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
HPS1-213ENST00000497527 MYH4Q9Y623 1939 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 STK36Q9NRP7 1315 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 SMIM22K7EJ46 135 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 ZSCAN22P10073 491 aaPredicted RBP14.21□□□□□ -0.13
HPS1-213ENST00000497527 ZNF280AP59817 542 aaPredicted RBP14.21□□□□□ -0.13
HPS1-213ENST00000497527 NFIAQ12857 509 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 ZSCAN29Q8IWY8 852 aaPredicted RBP14.21□□□□□ -0.13
HPS1-213ENST00000497527 WASF1Q92558 559 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 KAT14Q9H8E8 782 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 ZNF70Q9UC06 446 aaPredicted RBP14.21□□□□□ -0.13
HPS1-213ENST00000497527 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
HPS1-213ENST00000497527 MYH15Q9Y2K3 1946 aa14.21□□□□□ -0.14
HPS1-213ENST00000497527 H3BQV1 296 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 KIF5BP33176 963 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 TNFAIP1Q13829 316 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 FAM83AQ86UY5 434 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 TRIM22Q8IYM9 498 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 FANCBQ8NB91 859 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
HPS1-213ENST00000497527 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 FAM151AQ8WW52 585 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 ZBED3Q96IU2 234 aaPredicted RBP14.2□□□□□ -0.14
HPS1-213ENST00000497527 NCOA5Q9HCD5 579 aaKnown RBP14.2□□□□□ -0.14
HPS1-213ENST00000497527 MYOZ2Q9NPC6 264 aa14.2□□□□□ -0.14
HPS1-213ENST00000497527 TCHHQ07283 1943 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 VPS37CA5D8V6 355 aaPredicted RBP14.19□□□□□ -0.14
HPS1-213ENST00000497527 H7C1D1 291 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 JAK2O60674 1132 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 CTDNEP1O95476 244 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 F13A1P00488 732 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 GNAQP50148 359 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 EVX2Q03828 476 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 TCP10Q12799 353 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 SLC44A5Q8NCS7 719 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 DDX11Q96FC9 970 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 ORC3Q9UBD5 711 aaPredicted RBP14.19□□□□□ -0.14
HPS1-213ENST00000497527 HERC5Q9UII4 1024 aaKnown RBP14.19□□□□□ -0.14
HPS1-213ENST00000497527 PCDHAC2Q9Y5I4 1007 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
HPS1-213ENST00000497527 IFNAR1P17181 557 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 MCM4P33991 863 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 GMPSP49915 693 aaPredicted RBP14.18□□□□□ -0.14
HPS1-213ENST00000497527 SSRP1Q08945 709 aaKnown RBP14.18□□□□□ -0.14
HPS1-213ENST00000497527 PKP1Q13835 747 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
HPS1-213ENST00000497527 GPC2Q8N158 579 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
HPS1-213ENST00000497527 MTMR6Q9Y217 621 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
HPS1-213ENST00000497527 WNT10BO00744 389 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
HPS1-213ENST00000497527 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
HPS1-213ENST00000497527 CDC27P30260 824 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 SHMT1P34896 483 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 CACNB3P54284 484 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
HPS1-213ENST00000497527 TROAPQ12815 778 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms