RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 MCM5P33992 734 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 EXOSC10Q01780 885 aaKnown RBP21.57■■□□□ 1.04
RGP1-202ENST00000496906 DCAF15Q66K64 600 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 CDCA5Q96FF9 252 aa21.57■■□□□ 1.04
RGP1-202ENST00000496906 TSPY2A6NKD2 308 aa21.56■■□□□ 1.04
RGP1-202ENST00000496906 FAM47AQ5JRC9 791 aa21.56■■□□□ 1.04
RGP1-202ENST00000496906 TCEANC2Q96MN5 208 aa21.56■■□□□ 1.04
RGP1-202ENST00000496906 WDR19Q8NEZ3 1342 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 PLIN4Q96Q06 1357 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 PRC1O43663 620 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 NEK4P51957 841 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 TFAP4Q01664 338 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 RRP1BQ14684 758 aaKnown RBP21.55■■□□□ 1.04
RGP1-202ENST00000496906 CERKLQ49MI3 558 aaPredicted RBP21.55■■□□□ 1.04
RGP1-202ENST00000496906 CHST3Q7LGC8 479 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 CCDC17Q96LX7 622 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 TTC14Q96N46 770 aa21.55■■□□□ 1.04
RGP1-202ENST00000496906 PHF20L1A8MW92 1017 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 AKR1B1P15121 316 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 ZNF341Q9BYN7 854 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 MYH8P13535 1937 aa21.54■■□□□ 1.04
RGP1-202ENST00000496906 CHADLQ6NUI6 762 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 NEDD1Q8NHV4 660 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 LRRC2Q9BYS8 371 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 TRAF5O00463 557 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 GDF11O95390 407 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 IQCA1Q86XH1 822 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 IL27Q8NEV9 243 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 MTA3Q9BTC8 594 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.53■■□□□ 1.04
RGP1-202ENST00000496906 TCP11L1Q9NUJ3 509 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 ZNF112Q9UJU3 913 aa21.53■■□□□ 1.04
RGP1-202ENST00000496906 NF2P35240 595 aa21.52■■□□□ 1.04
RGP1-202ENST00000496906 SHROOM1Q2M3G4 852 aaPredicted RBP21.52■■□□□ 1.04
RGP1-202ENST00000496906 TMEM87BQ96K49 555 aa21.52■■□□□ 1.04
RGP1-202ENST00000496906 ZKSCAN3Q9BRR0 538 aa21.52■■□□□ 1.04
RGP1-202ENST00000496906 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
RGP1-202ENST00000496906 GREB1LQ9C091 1923 aaPredicted RBP21.51■■□□□ 1.03
RGP1-202ENST00000496906 CAP2P40123 477 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 JAG1P78504 1218 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 ABCB5Q2M3G0 1257 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 Q6ZUG5 572 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 FBXL16Q8N461 479 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 IGDCC4Q8TDY8 1250 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 KLRG1Q96E93 195 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 ZSCAN10Q96SZ4 725 aaPredicted RBP21.51■■□□□ 1.03
RGP1-202ENST00000496906 UBAC1Q9BSL1 405 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 AGXT2Q9BYV1 514 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 ALDH8A1Q9H2A2 487 aaPredicted RBP21.51■■□□□ 1.03
RGP1-202ENST00000496906 IL17RBQ9NRM6 502 aa21.51■■□□□ 1.03
RGP1-202ENST00000496906 IGKV6D-41A0A0C4DH26 115 aa21.5■■□□□ 1.03
RGP1-202ENST00000496906 MPHOSPH10O00566 681 aaKnown RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 IFIT3O14879 490 aaKnown RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 ST18O60284 1047 aa21.5■■□□□ 1.03
RGP1-202ENST00000496906 NMT2O60551 498 aa21.5■■□□□ 1.03
RGP1-202ENST00000496906 USP2O75604 605 aaPredicted RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 FMR1Q06787 632 aaKnown RBP eCLIP21.5■■□□□ 1.03
RGP1-202ENST00000496906 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 GPHNQ9NQX3 736 aaPredicted RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
RGP1-202ENST00000496906 TNKSO95271 1327 aa21.5■■□□□ 1.03
RGP1-202ENST00000496906 PPP1R12BO60237 982 aaPredicted RBP21.49■■□□□ 1.03
RGP1-202ENST00000496906 ITGBL1O95965 494 aaPredicted RBP21.49■■□□□ 1.03
RGP1-202ENST00000496906 GH2P01242 217 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 GUCY1A2P33402 732 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 AK2P54819 239 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 PRKG1Q13976 671 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 TOB2Q14106 344 aaPredicted RBP21.49■■□□□ 1.03
RGP1-202ENST00000496906 SEC23AQ15436 765 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 TMEM67Q5HYA8 995 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 TMEM179Q6ZVK1 233 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 ENAHQ8N8S7 591 aaPredicted RBP21.49■■□□□ 1.03
RGP1-202ENST00000496906 WRNIP1Q96S55 665 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 ZBTB21Q9ULJ3 1066 aa21.49■■□□□ 1.03
RGP1-202ENST00000496906 ANGEL1Q9UNK9 670 aaKnown RBP21.49■■□□□ 1.03
RGP1-202ENST00000496906 CTNND1O60716 968 aaKnown RBP21.48■■□□□ 1.03
RGP1-202ENST00000496906 CD2BP2O95400 341 aaKnown RBP21.48■■□□□ 1.03
RGP1-202ENST00000496906 INPP5BP32019 993 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.48■■□□□ 1.03
RGP1-202ENST00000496906 CEP95Q96GE4 821 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 LY9Q9HBG7 655 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 CABP5Q9NP86 173 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 ERICH2A1L162 156 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 NOVP48745 357 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 FGD1P98174 961 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 CCDC178Q5BJE1 867 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 BRF1Q92994 677 aa21.48■■□□□ 1.03
RGP1-202ENST00000496906 LIFRP42702 1097 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 WTAPQ15007 396 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 SEPT2Q15019 361 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 ANKRD1Q15327 319 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 RCSD1Q6JBY9 416 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 DGKHQ86XP1 1220 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 CLEC10AQ8IUN9 316 aa21.47■■□□□ 1.03
RGP1-202ENST00000496906 PAPPA2Q9BXP8 1791 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms