RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SBK1Q52WX2 424 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 RILPL1Q5EBL4 403 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 RESP18Q5W5W9 173 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 SHC4Q6S5L8 630 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 DRC7Q8IY82 874 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 SEPT12Q8IYM1 358 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 LRRC4BQ9NT99 713 aa15.05■□□□□ -0
GARNL3-220ENST00000496711 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
GARNL3-220ENST00000496711 DDX60LQ5H9U9 1706 aaKnown RBP15.04■□□□□ -0
GARNL3-220ENST00000496711 A0A087WWV3 80 aa15.04■□□□□ -0
GARNL3-220ENST00000496711 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
GARNL3-220ENST00000496711 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
GARNL3-220ENST00000496711 BPIFA3Q9BQP9 254 aa15.04■□□□□ -0
GARNL3-220ENST00000496711 JAG2Q9Y219 1238 aa15.04■□□□□ -0
GARNL3-220ENST00000496711 R3HCC1Q9Y3T6 440 aaKnown RBP15.04■□□□□ -0
GARNL3-220ENST00000496711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 XBP1P17861 261 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 PTGS1P23219 599 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 NOLC1Q14978 699 aaKnown RBP eCLIP15.03■□□□□ -0
GARNL3-220ENST00000496711 ZNF804AQ7Z570 1209 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 AOPEPQ8N6M6 819 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 RPGRQ92834 1020 aaKnown RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 MRFAP1L1Q96HT8 127 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 ANO8Q9HCE9 1232 aaPredicted RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 CLIP2Q9UDT6 1046 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 LDHBP07195 334 aaKnown RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 TOB1P50616 345 aaPredicted RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 NLRP12P59046 1061 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 PDE4BQ07343 736 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 TROAPQ12815 778 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 LTBP1Q14766 1721 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 DPCR1Q3MIW9 517 aa15.03■□□□□ -0
GARNL3-220ENST00000496711 KRI1Q8N9T8 703 aaKnown RBP15.03■□□□□ -0
GARNL3-220ENST00000496711 FOCADQ5VW36 1801 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 PRPF3O43395 683 aaKnown RBP15.02■□□□□ -0
GARNL3-220ENST00000496711 ST5P78524 1137 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 EVX2Q03828 476 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 FUT2Q10981 343 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 C15orf52Q6ZUT6 534 aaKnown RBP15.02■□□□□ -0
GARNL3-220ENST00000496711 CCDC186Q7Z3E2 898 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 KIAA1524Q8TCG1 905 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 CERKQ8TCT0 537 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 FBXW7Q969H0 707 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 CLIC6Q96NY7 704 aa15.02■□□□□ -0
GARNL3-220ENST00000496711 ROBO3Q96MS0 1386 aa15.02□□□□□ -0.01
GARNL3-220ENST00000496711 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 CYP2D6P10635 497 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 NT5C2P49902 561 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 GSTO1P78417 241 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 NR5A1Q13285 461 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 PKN1Q16512 942 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 SLC51AQ86UW1 340 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 PYCARDQ9ULZ3 195 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 CEP131Q9UPN4 1083 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 CNTNAP5Q8WYK1 1306 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 GYS1P13807 737 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 C17orf53Q8N3J3 647 aaPredicted RBP15.01□□□□□ -0.01
GARNL3-220ENST00000496711 CTCFLQ8NI51 663 aaPredicted RBP15.01□□□□□ -0.01
GARNL3-220ENST00000496711 OXER1Q8TDS5 423 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 PHF20Q9BVI0 1012 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 MCM9Q9NXL9 1143 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 TUBE1Q9UJT0 475 aa15.01□□□□□ -0.01
GARNL3-220ENST00000496711 FBXO2Q9UK22 296 aaPredicted RBP15.01□□□□□ -0.01
GARNL3-220ENST00000496711 MYH1P12882 1939 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 KRT2P35908 639 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 FAM47AQ5JRC9 791 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 DNTTIP2Q5QJE6 756 aaKnown RBP15□□□□□ -0.01
GARNL3-220ENST00000496711 SHISA4Q96DD7 197 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 NRBP1Q9UHY1 535 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 KCNH3Q9ULD8 1083 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
GARNL3-220ENST00000496711 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 BIN1O00499 593 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 NMT2O60551 498 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 PTPREP23469 700 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 USP5P45974 858 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 GPSM2P81274 684 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 KRBA2Q6ZNG9 492 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 NOL10Q9BSC4 688 aaKnown RBP14.99□□□□□ -0.01
GARNL3-220ENST00000496711 FAM13BQ9NYF5 915 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 PCDHB6Q9Y5E3 794 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 UFL1O94874 794 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 BAG3O95817 575 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 SERPINB2P05120 415 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 USP17L8P0C7I0 530 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 HSPA1LP34931 641 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 TPM4P67936 248 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 C12orf60Q5U649 245 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 SH3RF3Q8TEJ3 882 aaPredicted RBP14.99□□□□□ -0.01
GARNL3-220ENST00000496711 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
GARNL3-220ENST00000496711 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
GARNL3-220ENST00000496711 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms